Gene : Glyma.02G057400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  574
Name:  ? Glyma.02G057400 Secondary Identifier:  ? PAC:30507938
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G057400 0.5kb upstream 0.5kb upstream 8130 true Chr02: 5143013-5151142 Glycine max
Glyma.02G057400 0.5kb upstream 0.5kb upstream 500 false Chr02: 5150643-5151142 Glycine max
Glyma.02G057400 0.5kb downstream 0.5kb downstream 8130 true Chr02: 5142513-5150642 Glycine max
Glyma.02G057400 0.5kb downstream 0.5kb downstream 500 false Chr02: 5142513-5143012 Glycine max
Glyma.02G057400 1.0kb upstream 1.0kb upstream 8630 true Chr02: 5143013-5151642 Glycine max
Glyma.02G057400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5150643-5151642 Glycine max
Glyma.02G057400 1.0kb downstream 1.0kb downstream 8630 true Chr02: 5142013-5150642 Glycine max
Glyma.02G057400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5142013-5143012 Glycine max
Glyma.02G057400 2.0kb upstream 2.0kb upstream 9630 true Chr02: 5143013-5152642 Glycine max
Glyma.02G057400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5150643-5152642 Glycine max
Glyma.02G057400 2.0kb downstream 2.0kb downstream 9630 true Chr02: 5141013-5150642 Glycine max
Glyma.02G057400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5141013-5143012 Glycine max
Glyma.02G057400 5.0kb upstream 5.0kb upstream 12630 true Chr02: 5143013-5155642 Glycine max
Glyma.02G057400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5150643-5155642 Glycine max
Glyma.02G057400 5.0kb downstream 5.0kb downstream 12630 true Chr02: 5138013-5150642 Glycine max
Glyma.02G057400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5138013-5143012 Glycine max
Glyma.02G057400 10.0kb upstream 10.0kb upstream 17630 true Chr02: 5143013-5160642 Glycine max
Glyma.02G057400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5150643-5160642 Glycine max
Glyma.02G057400 10.0kb downstream 10.0kb downstream 17630 true Chr02: 5133013-5150642 Glycine max
Glyma.02G057400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5133013-5143012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310620 5265 Fabidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.1693 0.0 81.2946 High High
cufflinks 4.92392 0.0 13.6693   Low
cufflinks 55.385 0.0 168.706 High High
cufflinks 8.38773 0.0 22.5129    
cufflinks 15.3354 0.0 41.0446    
cufflinks 8.42242 0.0 22.6102    
cufflinks 7.88523 0.0 21.2188    
cufflinks 4.31935 0.0 12.1417   Low
cufflinks 11.6472 0.0 31.0744    
cufflinks 0.608       Low
cufflinks 4.137        
cufflinks 10.898     High High
cufflinks 7.832     High High
cufflinks 12.655     High High
cufflinks 1.326        
cufflinks 1.587        
cufflinks 1.156        
cufflinks 7.051       High
cufflinks 1.371        
cufflinks 0.74       Low
cufflinks 7.802     High High
cufflinks 1.266        
cufflinks 2.103        
cufflinks 3.39        
cufflinks 1.109        
cufflinks 3.501        

0 Strain