Gene : Glyma.02G079400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14154//PTHR14154:SF12 - UPF0041 BRAIN PROTEIN 44-RELATED Genomic Order:  794
Name:  ? Glyma.02G079400 Secondary Identifier:  ? PAC:30510730
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G079400 0.5kb upstream 0.5kb upstream 2563 true Chr02: 6856123-6858685 Glycine max
Glyma.02G079400 0.5kb upstream 0.5kb upstream 500 false Chr02: 6856123-6856622 Glycine max
Glyma.02G079400 0.5kb downstream 0.5kb downstream 2563 true Chr02: 6856623-6859185 Glycine max
Glyma.02G079400 0.5kb downstream 0.5kb downstream 500 false Chr02: 6858686-6859185 Glycine max
Glyma.02G079400 1.0kb upstream 1.0kb upstream 3063 true Chr02: 6855623-6858685 Glycine max
Glyma.02G079400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6855623-6856622 Glycine max
Glyma.02G079400 1.0kb downstream 1.0kb downstream 3063 true Chr02: 6856623-6859685 Glycine max
Glyma.02G079400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6858686-6859685 Glycine max
Glyma.02G079400 2.0kb upstream 2.0kb upstream 4063 true Chr02: 6854623-6858685 Glycine max
Glyma.02G079400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6854623-6856622 Glycine max
Glyma.02G079400 2.0kb downstream 2.0kb downstream 4063 true Chr02: 6856623-6860685 Glycine max
Glyma.02G079400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6858686-6860685 Glycine max
Glyma.02G079400 5.0kb upstream 5.0kb upstream 7063 true Chr02: 6851623-6858685 Glycine max
Glyma.02G079400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6851623-6856622 Glycine max
Glyma.02G079400 5.0kb downstream 5.0kb downstream 7063 true Chr02: 6856623-6863685 Glycine max
Glyma.02G079400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6858686-6863685 Glycine max
Glyma.02G079400 10.0kb upstream 10.0kb upstream 12063 true Chr02: 6846623-6858685 Glycine max
Glyma.02G079400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6846623-6856622 Glycine max
Glyma.02G079400 10.0kb downstream 10.0kb downstream 12063 true Chr02: 6856623-6868685 Glycine max
Glyma.02G079400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6858686-6868685 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310555 5265 Fabidae View MSA
124063800 5270 Rosid View MSA
123736472 5271 Pentapetalae View MSA
122789298 5272 Eudicot View MSA
122046872 5273 Angiosperm View MSA
121349731 5274 Embryophyte View MSA
123425778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.017 0.0 35.8804   High
cufflinks 3.91644 0.0 12.4999    
cufflinks 0.522613 0.0 1.96889    
cufflinks 0.899102 0.0 3.29566    
cufflinks 0.302722 0.0 1.16994   Low
cufflinks 0.221647 0.0 0.867514 Low Low
cufflinks 0.833765 0.0 3.07611    
cufflinks 2.97908 0.0 9.83679    
cufflinks 0.839466 0.0 3.0935    
cufflinks 2.72        
cufflinks 1.409        
cufflinks 0.835        
cufflinks 0.141       Low
cufflinks 0.035     Low Low
cufflinks 0.091       Low
cufflinks 9.89     High High
cufflinks 0.609        
cufflinks 1.222        
cufflinks 1.189        
cufflinks 9.991     High High
cufflinks 1.494        
cufflinks 9.206     High High
cufflinks 5.635        
cufflinks 1.958        
cufflinks 11.25     High High
cufflinks 0.852        

0 Strain