Gene : Glyma.02G098800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31003:SF4 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K13N2-RELATED Genomic Order:  988
Name:  ? Glyma.02G098800 Secondary Identifier:  ? PAC:30508407
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G098800 0.5kb upstream 0.5kb upstream 3380 true Chr02: 9169020-9172399 Glycine max
Glyma.02G098800 0.5kb upstream 0.5kb upstream 500 false Chr02: 9171900-9172399 Glycine max
Glyma.02G098800 0.5kb downstream 0.5kb downstream 3380 true Chr02: 9168520-9171899 Glycine max
Glyma.02G098800 0.5kb downstream 0.5kb downstream 500 false Chr02: 9168520-9169019 Glycine max
Glyma.02G098800 1.0kb upstream 1.0kb upstream 3880 true Chr02: 9169020-9172899 Glycine max
Glyma.02G098800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9171900-9172899 Glycine max
Glyma.02G098800 1.0kb downstream 1.0kb downstream 3880 true Chr02: 9168020-9171899 Glycine max
Glyma.02G098800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9168020-9169019 Glycine max
Glyma.02G098800 2.0kb upstream 2.0kb upstream 4880 true Chr02: 9169020-9173899 Glycine max
Glyma.02G098800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9171900-9173899 Glycine max
Glyma.02G098800 2.0kb downstream 2.0kb downstream 4880 true Chr02: 9167020-9171899 Glycine max
Glyma.02G098800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9167020-9169019 Glycine max
Glyma.02G098800 5.0kb upstream 5.0kb upstream 7880 true Chr02: 9169020-9176899 Glycine max
Glyma.02G098800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9171900-9176899 Glycine max
Glyma.02G098800 5.0kb downstream 5.0kb downstream 7880 true Chr02: 9164020-9171899 Glycine max
Glyma.02G098800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9164020-9169019 Glycine max
Glyma.02G098800 10.0kb upstream 10.0kb upstream 12880 true Chr02: 9169020-9181899 Glycine max
Glyma.02G098800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9171900-9181899 Glycine max
Glyma.02G098800 10.0kb downstream 10.0kb downstream 12880 true Chr02: 9159020-9171899 Glycine max
Glyma.02G098800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9159020-9169019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310107 5265 Fabidae View MSA
124062627 5270 Rosid View MSA
123739089 5271 Pentapetalae View MSA
122790332 5272 Eudicot View MSA
122043358 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.5784 0.0 8.28835    
cufflinks 0.884871 0.0 3.17728   Low
cufflinks 12.5013 0.0 33.6958   High
cufflinks 3.56409 0.0 10.8978    
cufflinks 2.46378 0.0 7.96678    
cufflinks 3.07281 0.0 9.63271    
cufflinks 5.55887 0.0 16.0538    
cufflinks 0.453747 0.0 1.69027   Low
cufflinks 3.25658 0.0 10.1124    
cufflinks 1.144       Low
cufflinks 14.578     High High
cufflinks 7.509     High  
cufflinks 2.866        
cufflinks 2.217        
cufflinks 24.884     High High
cufflinks 3.848        
cufflinks 3.137        
cufflinks 2.261        
cufflinks 1.418       Low
cufflinks 3.601        
cufflinks 9.252     High  
cufflinks 2.617        
cufflinks 3.174        
cufflinks 7.314     High  
cufflinks 4.809        
cufflinks 18.801     High High

0 Strain