Gene : Glyma.02G125200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12565:SF121 - TRANSCRIPTION FACTOR BHLH49 Genomic Order:  1252
Name:  ? Glyma.02G125200 Secondary Identifier:  ? PAC:30508184
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G125200 0.5kb upstream 0.5kb upstream 4130 true Chr02: 12508796-12512925 Glycine max
Glyma.02G125200 0.5kb upstream 0.5kb upstream 500 false Chr02: 12512426-12512925 Glycine max
Glyma.02G125200 0.5kb downstream 0.5kb downstream 4130 true Chr02: 12508296-12512425 Glycine max
Glyma.02G125200 0.5kb downstream 0.5kb downstream 500 false Chr02: 12508296-12508795 Glycine max
Glyma.02G125200 1.0kb upstream 1.0kb upstream 4630 true Chr02: 12508796-12513425 Glycine max
Glyma.02G125200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12512426-12513425 Glycine max
Glyma.02G125200 1.0kb downstream 1.0kb downstream 4630 true Chr02: 12507796-12512425 Glycine max
Glyma.02G125200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12507796-12508795 Glycine max
Glyma.02G125200 2.0kb upstream 2.0kb upstream 5630 true Chr02: 12508796-12514425 Glycine max
Glyma.02G125200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12512426-12514425 Glycine max
Glyma.02G125200 2.0kb downstream 2.0kb downstream 5630 true Chr02: 12506796-12512425 Glycine max
Glyma.02G125200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12506796-12508795 Glycine max
Glyma.02G125200 5.0kb upstream 5.0kb upstream 8630 true Chr02: 12508796-12517425 Glycine max
Glyma.02G125200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12512426-12517425 Glycine max
Glyma.02G125200 5.0kb downstream 5.0kb downstream 8630 true Chr02: 12503796-12512425 Glycine max
Glyma.02G125200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12503796-12508795 Glycine max
Glyma.02G125200 10.0kb upstream 10.0kb upstream 13630 true Chr02: 12508796-12522425 Glycine max
Glyma.02G125200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12512426-12522425 Glycine max
Glyma.02G125200 10.0kb downstream 10.0kb downstream 13630 true Chr02: 12498796-12512425 Glycine max
Glyma.02G125200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12498796-12508795 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300894 5265 Fabidae View MSA
124064699 5270 Rosid View MSA
123741271 5271 Pentapetalae View MSA
122787397 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1011 0.0 43.6363   Low
cufflinks 10.5843 0.0 46.9727   Low
cufflinks 14.3031 0.0 54.1732    
cufflinks 20.9307 0.0 104.209 High High
cufflinks 17.134 0.0 77.7162    
cufflinks 12.4651 0.0 54.807    
cufflinks 22.1792 0.0 93.3607 High High
cufflinks 10.5646 0.0 43.9088   Low
cufflinks 20.3128 0.0 78.8133 High High
cufflinks 1.818        
cufflinks 0.968       Low
cufflinks 4.146       High
cufflinks 4.983       High
cufflinks 3.456        
cufflinks 1.96        
cufflinks 1.898        
cufflinks 0.91       Low
cufflinks 5.705       High
cufflinks 2.939        
cufflinks 2.251        
cufflinks 0.939       Low
cufflinks 2.27        
cufflinks 1.522        
cufflinks 1.11       Low
cufflinks 2.031        
cufflinks 1.235        

0 Strain