Gene : Glyma.01G219400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11592//PTHR11592:SF42 - GLUTATHIONE PEROXIDASE Genomic Order:  2194
Name:  ? Glyma.01G219400 Secondary Identifier:  ? PAC:30543514
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G219400 0.5kb upstream 0.5kb upstream 1852 true Chr01: 54898089-54899940 Glycine max
Glyma.01G219400 0.5kb upstream 0.5kb upstream 500 false Chr01: 54898089-54898588 Glycine max
Glyma.01G219400 0.5kb downstream 0.5kb downstream 1852 true Chr01: 54898589-54900440 Glycine max
Glyma.01G219400 0.5kb downstream 0.5kb downstream 500 false Chr01: 54899941-54900440 Glycine max
Glyma.01G219400 1.0kb upstream 1.0kb upstream 2352 true Chr01: 54897589-54899940 Glycine max
Glyma.01G219400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54897589-54898588 Glycine max
Glyma.01G219400 1.0kb downstream 1.0kb downstream 2352 true Chr01: 54898589-54900940 Glycine max
Glyma.01G219400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54899941-54900940 Glycine max
Glyma.01G219400 2.0kb upstream 2.0kb upstream 3352 true Chr01: 54896589-54899940 Glycine max
Glyma.01G219400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54896589-54898588 Glycine max
Glyma.01G219400 2.0kb downstream 2.0kb downstream 3352 true Chr01: 54898589-54901940 Glycine max
Glyma.01G219400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54899941-54901940 Glycine max
Glyma.01G219400 5.0kb upstream 5.0kb upstream 6352 true Chr01: 54893589-54899940 Glycine max
Glyma.01G219400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54893589-54898588 Glycine max
Glyma.01G219400 5.0kb downstream 5.0kb downstream 6352 true Chr01: 54898589-54904940 Glycine max
Glyma.01G219400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54899941-54904940 Glycine max
Glyma.01G219400 10.0kb upstream 10.0kb upstream 11352 true Chr01: 54888589-54899940 Glycine max
Glyma.01G219400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54888589-54898588 Glycine max
Glyma.01G219400 10.0kb downstream 10.0kb downstream 11352 true Chr01: 54898589-54909940 Glycine max
Glyma.01G219400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54899941-54909940 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313001 5265 Fabidae View MSA
124066443 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7415 0.0 44.5026    
cufflinks 6.31171 0.0 20.1081    
cufflinks 6.19512 0.0 19.737    
cufflinks 8.7803 0.0 26.6469    
cufflinks 6.84826 0.0 21.6153    
cufflinks 61.0983 0.0 163.646 High High
cufflinks 248.484 0.0 773.243 High High
cufflinks 4.04793 0.0 13.6534    
cufflinks 1.33649 0.0 4.92296   Low
cufflinks 1.498       Low
cufflinks 5.568     High  
cufflinks 9.609     High High
cufflinks 2.235        
cufflinks 1.896        
cufflinks 0.451       Low
cufflinks 7.269     High  
cufflinks 4.481        
cufflinks 4.091        
cufflinks 1.252       Low
cufflinks 4.686        
cufflinks 4.184        
cufflinks 5.65        
cufflinks 7.615     High High
cufflinks 2.772        
cufflinks 6.869        
cufflinks 2.884        

0 Strain