Gene : Glyma.01G218600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF269 - EXPRESSED PROTEIN Genomic Order:  2186
Name:  ? Glyma.01G218600 Secondary Identifier:  ? PAC:30541536
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G218600 0.5kb upstream 0.5kb upstream 6081 true Chr01: 54849376-54855456 Glycine max
Glyma.01G218600 0.5kb upstream 0.5kb upstream 500 false Chr01: 54854957-54855456 Glycine max
Glyma.01G218600 0.5kb downstream 0.5kb downstream 6081 true Chr01: 54848876-54854956 Glycine max
Glyma.01G218600 0.5kb downstream 0.5kb downstream 500 false Chr01: 54848876-54849375 Glycine max
Glyma.01G218600 1.0kb upstream 1.0kb upstream 6581 true Chr01: 54849376-54855956 Glycine max
Glyma.01G218600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54854957-54855956 Glycine max
Glyma.01G218600 1.0kb downstream 1.0kb downstream 6581 true Chr01: 54848376-54854956 Glycine max
Glyma.01G218600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54848376-54849375 Glycine max
Glyma.01G218600 2.0kb upstream 2.0kb upstream 7581 true Chr01: 54849376-54856956 Glycine max
Glyma.01G218600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54854957-54856956 Glycine max
Glyma.01G218600 2.0kb downstream 2.0kb downstream 7581 true Chr01: 54847376-54854956 Glycine max
Glyma.01G218600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54847376-54849375 Glycine max
Glyma.01G218600 5.0kb upstream 5.0kb upstream 10581 true Chr01: 54849376-54859956 Glycine max
Glyma.01G218600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54854957-54859956 Glycine max
Glyma.01G218600 5.0kb downstream 5.0kb downstream 10581 true Chr01: 54844376-54854956 Glycine max
Glyma.01G218600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54844376-54849375 Glycine max
Glyma.01G218600 10.0kb upstream 10.0kb upstream 15581 true Chr01: 54849376-54864956 Glycine max
Glyma.01G218600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54854957-54864956 Glycine max
Glyma.01G218600 10.0kb downstream 10.0kb downstream 15581 true Chr01: 54839376-54854956 Glycine max
Glyma.01G218600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54839376-54849375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255068 5265 Fabidae View MSA
124067158 5270 Rosid View MSA
123753416 5271 Pentapetalae View MSA
122789059 5272 Eudicot View MSA
122047534 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.7113 0.0 63.2933 High High
cufflinks 2.21575 0.0 7.34273    
cufflinks 5.06345 0.0 14.8759    
cufflinks 1.36804 0.0 4.77584   Low
cufflinks 3.35636 0.0 10.5332    
cufflinks 2.55441 0.0 8.30507    
cufflinks 1.99207 0.0 6.70426    
cufflinks 2.12277 0.0 7.07454    
cufflinks 2.66108 0.0 8.60644    
cufflinks 0.206       Low
cufflinks 2.6        
cufflinks 1.66        
cufflinks 1.88        
cufflinks 3.498        
cufflinks 1.068        
cufflinks 4.17        
cufflinks 0.258       Low
cufflinks 1.216        
cufflinks 0.502       Low
cufflinks 4.625        
cufflinks 2.649        
cufflinks 3.999        
cufflinks 3.596        
cufflinks 4.442        
cufflinks 5.667       High
cufflinks 1.503        

0 Strain