Gene : Glyma.18G277800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Genomic Order:  2778
Name:  ? Glyma.18G277800 Secondary Identifier:  ? PAC:30554667
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G277800 0.5kb upstream 0.5kb upstream 833 true Chr18: 55950684-55951516 Glycine max
Glyma.18G277800 0.5kb upstream 0.5kb upstream 500 false Chr18: 55951017-55951516 Glycine max
Glyma.18G277800 0.5kb downstream 0.5kb downstream 833 true Chr18: 55950184-55951016 Glycine max
Glyma.18G277800 0.5kb downstream 0.5kb downstream 500 false Chr18: 55950184-55950683 Glycine max
Glyma.18G277800 1.0kb upstream 1.0kb upstream 1333 true Chr18: 55950684-55952016 Glycine max
Glyma.18G277800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55951017-55952016 Glycine max
Glyma.18G277800 1.0kb downstream 1.0kb downstream 1333 true Chr18: 55949684-55951016 Glycine max
Glyma.18G277800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55949684-55950683 Glycine max
Glyma.18G277800 2.0kb upstream 2.0kb upstream 2333 true Chr18: 55950684-55953016 Glycine max
Glyma.18G277800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55951017-55953016 Glycine max
Glyma.18G277800 2.0kb downstream 2.0kb downstream 2333 true Chr18: 55948684-55951016 Glycine max
Glyma.18G277800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55948684-55950683 Glycine max
Glyma.18G277800 5.0kb upstream 5.0kb upstream 5333 true Chr18: 55950684-55956016 Glycine max
Glyma.18G277800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55951017-55956016 Glycine max
Glyma.18G277800 5.0kb downstream 5.0kb downstream 5333 true Chr18: 55945684-55951016 Glycine max
Glyma.18G277800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55945684-55950683 Glycine max
Glyma.18G277800 10.0kb upstream 10.0kb upstream 10333 true Chr18: 55950684-55961016 Glycine max
Glyma.18G277800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55951017-55961016 Glycine max
Glyma.18G277800 10.0kb downstream 10.0kb downstream 10333 true Chr18: 55940684-55951016 Glycine max
Glyma.18G277800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55940684-55950683 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313286 5265 Fabidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.413048 0.0 1.71283    
cufflinks 0.0856542 0.0 0.405251 Low Low
cufflinks 0.0769224 0.0 0.369845 Low Low
cufflinks 3.34699 0.0 12.6863   High
cufflinks 0.81187 0.0 3.25921    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.405171 0.0 1.67791    
cufflinks 3.28965 0.0 12.4638   High
cufflinks 0.185        
cufflinks 16.383     High High
cufflinks 0.231        
cufflinks 0.354        
cufflinks 0.091       Low
cufflinks 7.849     High  
cufflinks 0.385        
cufflinks 12.879     High High
cufflinks 0.234        
cufflinks 0.113        
cufflinks 0.111        
cufflinks 53.954     High High
cufflinks 0.212        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.904     High High
cufflinks 0.211        
cufflinks 43.152     High High

0 Strain