Gene : Glyma.01G222500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10782:SF4 - SUPPRESSOR OF VARIEGATION 2-10, ISOFORM I Genomic Order:  2225
Name:  ? Glyma.01G222500 Secondary Identifier:  ? PAC:30543711
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G222500 0.5kb upstream 0.5kb upstream 8824 true Chr01: 55131007-55139830 Glycine max
Glyma.01G222500 0.5kb upstream 0.5kb upstream 500 false Chr01: 55139331-55139830 Glycine max
Glyma.01G222500 0.5kb downstream 0.5kb downstream 8824 true Chr01: 55130507-55139330 Glycine max
Glyma.01G222500 0.5kb downstream 0.5kb downstream 500 false Chr01: 55130507-55131006 Glycine max
Glyma.01G222500 1.0kb upstream 1.0kb upstream 9324 true Chr01: 55131007-55140330 Glycine max
Glyma.01G222500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55139331-55140330 Glycine max
Glyma.01G222500 1.0kb downstream 1.0kb downstream 9324 true Chr01: 55130007-55139330 Glycine max
Glyma.01G222500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55130007-55131006 Glycine max
Glyma.01G222500 2.0kb upstream 2.0kb upstream 10324 true Chr01: 55131007-55141330 Glycine max
Glyma.01G222500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55139331-55141330 Glycine max
Glyma.01G222500 2.0kb downstream 2.0kb downstream 10324 true Chr01: 55129007-55139330 Glycine max
Glyma.01G222500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55129007-55131006 Glycine max
Glyma.01G222500 5.0kb upstream 5.0kb upstream 13324 true Chr01: 55131007-55144330 Glycine max
Glyma.01G222500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55139331-55144330 Glycine max
Glyma.01G222500 5.0kb downstream 5.0kb downstream 13324 true Chr01: 55126007-55139330 Glycine max
Glyma.01G222500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55126007-55131006 Glycine max
Glyma.01G222500 10.0kb upstream 10.0kb upstream 18324 true Chr01: 55131007-55149330 Glycine max
Glyma.01G222500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55139331-55149330 Glycine max
Glyma.01G222500 10.0kb downstream 10.0kb downstream 18324 true Chr01: 55121007-55139330 Glycine max
Glyma.01G222500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55121007-55131006 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302003 5265 Fabidae View MSA
124062957 5270 Rosid View MSA
123737680 5271 Pentapetalae View MSA
122797749 5272 Eudicot View MSA
122050924 5273 Angiosperm View MSA
121346660 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.19357 0.0 14.329    
cufflinks 6.08474 0.0 22.1936    
cufflinks 5.63132 0.0 20.3952    
cufflinks 6.90448 0.0 24.5598    
cufflinks 4.89097 0.0 18.4675    
cufflinks 4.21249 0.0 14.305    
cufflinks 11.5123 0.0 39.9415   High
cufflinks 5.03312 0.0 16.6976    
cufflinks 4.92167 0.0 16.8211    
cufflinks 0.461        
cufflinks 0.22       Low
cufflinks 0.691        
cufflinks 0.494        
cufflinks 0.578        
cufflinks 0.352        
cufflinks 0.691        
cufflinks 0.247       Low
cufflinks 0.69        
cufflinks 0.979       High
cufflinks 0.734        
cufflinks 0.321        
cufflinks 0.793        
cufflinks 0.795        
cufflinks 0.283       Low
cufflinks 0.695        
cufflinks 0.326        

0 Strain