Gene : Glyma.01G220000 G. max Wm82.a2.v1
Defline:  (1 of 2) PF04032 - RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) Genomic Order:  2200
Name:  ? Glyma.01G220000 Secondary Identifier:  ? PAC:30542780
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G220000 0.5kb upstream 0.5kb upstream 2589 true Chr01: 54942035-54944623 Glycine max
Glyma.01G220000 0.5kb upstream 0.5kb upstream 500 false Chr01: 54942035-54942534 Glycine max
Glyma.01G220000 0.5kb downstream 0.5kb downstream 2589 true Chr01: 54942535-54945123 Glycine max
Glyma.01G220000 0.5kb downstream 0.5kb downstream 500 false Chr01: 54944624-54945123 Glycine max
Glyma.01G220000 1.0kb upstream 1.0kb upstream 3089 true Chr01: 54941535-54944623 Glycine max
Glyma.01G220000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54941535-54942534 Glycine max
Glyma.01G220000 1.0kb downstream 1.0kb downstream 3089 true Chr01: 54942535-54945623 Glycine max
Glyma.01G220000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54944624-54945623 Glycine max
Glyma.01G220000 2.0kb upstream 2.0kb upstream 4089 true Chr01: 54940535-54944623 Glycine max
Glyma.01G220000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54940535-54942534 Glycine max
Glyma.01G220000 2.0kb downstream 2.0kb downstream 4089 true Chr01: 54942535-54946623 Glycine max
Glyma.01G220000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54944624-54946623 Glycine max
Glyma.01G220000 5.0kb upstream 5.0kb upstream 7089 true Chr01: 54937535-54944623 Glycine max
Glyma.01G220000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54937535-54942534 Glycine max
Glyma.01G220000 5.0kb downstream 5.0kb downstream 7089 true Chr01: 54942535-54949623 Glycine max
Glyma.01G220000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54944624-54949623 Glycine max
Glyma.01G220000 10.0kb upstream 10.0kb upstream 12089 true Chr01: 54932535-54944623 Glycine max
Glyma.01G220000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54932535-54942534 Glycine max
Glyma.01G220000 10.0kb downstream 10.0kb downstream 12089 true Chr01: 54942535-54954623 Glycine max
Glyma.01G220000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54944624-54954623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311743 5265 Fabidae View MSA
124068689 5270 Rosid View MSA
123752807 5271 Pentapetalae View MSA
122789291 5272 Eudicot View MSA
122046039 5273 Angiosperm View MSA
121350637 5274 Embryophyte View MSA
123381830 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58371 0.0 19.2957   High
cufflinks 4.93346 0.0 14.9936    
cufflinks 2.63272 0.0 8.71611   Low
cufflinks 4.77388 0.0 14.5438    
cufflinks 3.3245 0.0 10.7159    
cufflinks 4.17189 0.0 13.0035    
cufflinks 3.56908 0.0 11.4037    
cufflinks 7.81642 0.0 22.3288   High
cufflinks 4.71033 0.0 14.3944    
cufflinks 2.138       Low
cufflinks 2.801        
cufflinks 2.997        
cufflinks 2.837        
cufflinks 3.193        
cufflinks 3.105        
cufflinks 4.017        
cufflinks 2.202       Low
cufflinks 2.973        
cufflinks 3.678        
cufflinks 5.156       High
cufflinks 2.616        
cufflinks 4.692       High
cufflinks 3.752        
cufflinks 2.867        
cufflinks 4.676       High
cufflinks 2.211       Low

0 Strain