Gene : Glyma.18G278800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11570:SF4 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME-RELATED Genomic Order:  2788
Name:  ? Glyma.18G278800 Secondary Identifier:  ? PAC:30557762
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSPECAT-PWY Glycine max pathologic  
Gmax BSUBPOLYAMSYN-PWY Glycine max pathologic  
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G278800 0.5kb upstream 0.5kb upstream 3422 true Chr18: 56010994-56014415 Glycine max
Glyma.18G278800 0.5kb upstream 0.5kb upstream 500 false Chr18: 56013916-56014415 Glycine max
Glyma.18G278800 0.5kb downstream 0.5kb downstream 3422 true Chr18: 56010494-56013915 Glycine max
Glyma.18G278800 0.5kb downstream 0.5kb downstream 500 false Chr18: 56010494-56010993 Glycine max
Glyma.18G278800 1.0kb upstream 1.0kb upstream 3922 true Chr18: 56010994-56014915 Glycine max
Glyma.18G278800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56013916-56014915 Glycine max
Glyma.18G278800 1.0kb downstream 1.0kb downstream 3922 true Chr18: 56009994-56013915 Glycine max
Glyma.18G278800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56009994-56010993 Glycine max
Glyma.18G278800 2.0kb upstream 2.0kb upstream 4922 true Chr18: 56010994-56015915 Glycine max
Glyma.18G278800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56013916-56015915 Glycine max
Glyma.18G278800 2.0kb downstream 2.0kb downstream 4922 true Chr18: 56008994-56013915 Glycine max
Glyma.18G278800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56008994-56010993 Glycine max
Glyma.18G278800 5.0kb upstream 5.0kb upstream 7922 true Chr18: 56010994-56018915 Glycine max
Glyma.18G278800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56013916-56018915 Glycine max
Glyma.18G278800 5.0kb downstream 5.0kb downstream 7922 true Chr18: 56005994-56013915 Glycine max
Glyma.18G278800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56005994-56010993 Glycine max
Glyma.18G278800 10.0kb upstream 10.0kb upstream 12922 true Chr18: 56010994-56023915 Glycine max
Glyma.18G278800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56013916-56023915 Glycine max
Glyma.18G278800 10.0kb downstream 10.0kb downstream 12922 true Chr18: 56000994-56013915 Glycine max
Glyma.18G278800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56000994-56010993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299314 5265 Fabidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.73 0.0 534.398 High High
cufflinks 15.63 0.0 45.9781    
cufflinks 140.37 0.0 692.445 High High
cufflinks 21.8904 0.0 74.7731 High  
cufflinks 35.5547 0.0 109.274 High  
cufflinks 39.5034 0.0 124.588 High  
cufflinks 12.5346 0.0 37.4338   Low
cufflinks 29.0087 0.0 87.2277 High  
cufflinks 24.8812 0.0 73.7623 High  
cufflinks 7.185       Low
cufflinks 18.527     High  
cufflinks 35.937     High High
cufflinks 12.552     High  
cufflinks 8.68     High  
cufflinks 10.49     High  
cufflinks 9.415     High  
cufflinks 8.058     High  
cufflinks 16.754     High  
cufflinks 5.78       Low
cufflinks 10.136     High  
cufflinks 16.197     High  
cufflinks 10.67     High  
cufflinks 6.046       Low
cufflinks 29.094     High High
cufflinks 11.456     High  
cufflinks 20.47     High  

0 Strain