Gene : Glyma.01G226400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12953 - MEMBRANE PROTEIN CH1 RELATED Genomic Order:  2264
Name:  ? Glyma.01G226400 Secondary Identifier:  ? PAC:30544187
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G226400 0.5kb upstream 0.5kb upstream 3257 true Chr01: 55479667-55482923 Glycine max
Glyma.01G226400 0.5kb upstream 0.5kb upstream 500 false Chr01: 55482424-55482923 Glycine max
Glyma.01G226400 0.5kb downstream 0.5kb downstream 3257 true Chr01: 55479167-55482423 Glycine max
Glyma.01G226400 0.5kb downstream 0.5kb downstream 500 false Chr01: 55479167-55479666 Glycine max
Glyma.01G226400 1.0kb upstream 1.0kb upstream 3757 true Chr01: 55479667-55483423 Glycine max
Glyma.01G226400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55482424-55483423 Glycine max
Glyma.01G226400 1.0kb downstream 1.0kb downstream 3757 true Chr01: 55478667-55482423 Glycine max
Glyma.01G226400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55478667-55479666 Glycine max
Glyma.01G226400 2.0kb upstream 2.0kb upstream 4757 true Chr01: 55479667-55484423 Glycine max
Glyma.01G226400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55482424-55484423 Glycine max
Glyma.01G226400 2.0kb downstream 2.0kb downstream 4757 true Chr01: 55477667-55482423 Glycine max
Glyma.01G226400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55477667-55479666 Glycine max
Glyma.01G226400 5.0kb upstream 5.0kb upstream 7757 true Chr01: 55479667-55487423 Glycine max
Glyma.01G226400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55482424-55487423 Glycine max
Glyma.01G226400 5.0kb downstream 5.0kb downstream 7757 true Chr01: 55474667-55482423 Glycine max
Glyma.01G226400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55474667-55479666 Glycine max
Glyma.01G226400 10.0kb upstream 10.0kb upstream 12757 true Chr01: 55479667-55492423 Glycine max
Glyma.01G226400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55482424-55492423 Glycine max
Glyma.01G226400 10.0kb downstream 10.0kb downstream 12757 true Chr01: 55469667-55482423 Glycine max
Glyma.01G226400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55469667-55479666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308619 5265 Fabidae View MSA
124066197 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.248516 0.0 1.67101    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0141946 0.0 0.0689263 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.121        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.761       High
cufflinks 0.008     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain