Gene : Glyma.01G224100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  2241
Name:  ? Glyma.01G224100 Secondary Identifier:  ? PAC:30542356
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G224100 0.5kb upstream 0.5kb upstream 1832 true Chr01: 55285113-55286944 Glycine max
Glyma.01G224100 0.5kb upstream 0.5kb upstream 500 false Chr01: 55285113-55285612 Glycine max
Glyma.01G224100 0.5kb downstream 0.5kb downstream 1832 true Chr01: 55285613-55287444 Glycine max
Glyma.01G224100 0.5kb downstream 0.5kb downstream 500 false Chr01: 55286945-55287444 Glycine max
Glyma.01G224100 1.0kb upstream 1.0kb upstream 2332 true Chr01: 55284613-55286944 Glycine max
Glyma.01G224100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55284613-55285612 Glycine max
Glyma.01G224100 1.0kb downstream 1.0kb downstream 2332 true Chr01: 55285613-55287944 Glycine max
Glyma.01G224100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55286945-55287944 Glycine max
Glyma.01G224100 2.0kb upstream 2.0kb upstream 3332 true Chr01: 55283613-55286944 Glycine max
Glyma.01G224100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55283613-55285612 Glycine max
Glyma.01G224100 2.0kb downstream 2.0kb downstream 3332 true Chr01: 55285613-55288944 Glycine max
Glyma.01G224100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55286945-55288944 Glycine max
Glyma.01G224100 5.0kb upstream 5.0kb upstream 6332 true Chr01: 55280613-55286944 Glycine max
Glyma.01G224100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55280613-55285612 Glycine max
Glyma.01G224100 5.0kb downstream 5.0kb downstream 6332 true Chr01: 55285613-55291944 Glycine max
Glyma.01G224100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55286945-55291944 Glycine max
Glyma.01G224100 10.0kb upstream 10.0kb upstream 11332 true Chr01: 55275613-55286944 Glycine max
Glyma.01G224100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55275613-55285612 Glycine max
Glyma.01G224100 10.0kb downstream 10.0kb downstream 11332 true Chr01: 55285613-55296944 Glycine max
Glyma.01G224100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55286945-55296944 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313302 5265 Fabidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.39275 0.0 1.49364   Low
cufflinks 0.986131 0.0 3.5894   High
cufflinks 0.487458 0.0 1.84443    
cufflinks 0.611005 0.0 2.28099    
cufflinks 0.914947 0.0 3.33019   High
cufflinks 0.398266 0.0 1.51359    
cufflinks 0.882185 0.0 3.22399    
cufflinks 0.743451 0.0 2.74757    
cufflinks 0.338853 0.0 1.297   Low
cufflinks 4.0       High
cufflinks 0.211        
cufflinks 1.328        
cufflinks 0.927        
cufflinks 0.524        
cufflinks 0.044     Low Low
cufflinks 2.104        
cufflinks 0.556        
cufflinks 3.106       High
cufflinks 0.474        
cufflinks 1.286        
cufflinks 0.124       Low
cufflinks 1.72        
cufflinks 3.794       High
cufflinks 0.13       Low
cufflinks 0.878        
cufflinks 0.173       Low

0 Strain