Gene : Glyma.01G223700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  2237
Name:  ? Glyma.01G223700 Secondary Identifier:  ? PAC:30542995
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G223700 0.5kb upstream 0.5kb upstream 4390 true Chr01: 55245764-55250153 Glycine max
Glyma.01G223700 0.5kb upstream 0.5kb upstream 500 false Chr01: 55245764-55246263 Glycine max
Glyma.01G223700 0.5kb downstream 0.5kb downstream 4390 true Chr01: 55246264-55250653 Glycine max
Glyma.01G223700 0.5kb downstream 0.5kb downstream 500 false Chr01: 55250154-55250653 Glycine max
Glyma.01G223700 1.0kb upstream 1.0kb upstream 4890 true Chr01: 55245264-55250153 Glycine max
Glyma.01G223700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55245264-55246263 Glycine max
Glyma.01G223700 1.0kb downstream 1.0kb downstream 4890 true Chr01: 55246264-55251153 Glycine max
Glyma.01G223700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55250154-55251153 Glycine max
Glyma.01G223700 2.0kb upstream 2.0kb upstream 5890 true Chr01: 55244264-55250153 Glycine max
Glyma.01G223700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55244264-55246263 Glycine max
Glyma.01G223700 2.0kb downstream 2.0kb downstream 5890 true Chr01: 55246264-55252153 Glycine max
Glyma.01G223700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55250154-55252153 Glycine max
Glyma.01G223700 5.0kb upstream 5.0kb upstream 8890 true Chr01: 55241264-55250153 Glycine max
Glyma.01G223700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55241264-55246263 Glycine max
Glyma.01G223700 5.0kb downstream 5.0kb downstream 8890 true Chr01: 55246264-55255153 Glycine max
Glyma.01G223700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55250154-55255153 Glycine max
Glyma.01G223700 10.0kb upstream 10.0kb upstream 13890 true Chr01: 55236264-55250153 Glycine max
Glyma.01G223700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55236264-55246263 Glycine max
Glyma.01G223700 10.0kb downstream 10.0kb downstream 13890 true Chr01: 55246264-55260153 Glycine max
Glyma.01G223700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55250154-55260153 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301898 5265 Fabidae View MSA
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.514421 0.0 2.26647    
cufflinks 4.11273 0.0 14.1984    
cufflinks 0.137632 0.0 1.05849 Low Low
cufflinks 0.820769 0.0 4.36721    
cufflinks 2.51971 0.0 10.3181    
cufflinks 1.91516 0.0 8.20953    
cufflinks 2.76735 0.0 11.1291    
cufflinks 4.53152 0.0 15.7723    
cufflinks 2.47148 0.0 9.91181    
cufflinks 1.364       High
cufflinks 0.108       Low
cufflinks 0.231        
cufflinks 0.844       High
cufflinks 0.727        
cufflinks 0.321        
cufflinks 0.402        
cufflinks 0.322        
cufflinks 0.306        
cufflinks 1.841       High
cufflinks 0.289        
cufflinks 0.104       Low
cufflinks 0.266        
cufflinks 0.421        
cufflinks 0.045     Low Low
cufflinks 0.286        
cufflinks 0.269        

0 Strain