Gene : Glyma.18G279400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31209:SF0 - COFACTOR-INDEPENDENT PHOSPHOGLYCERATE MUTASE Genomic Order:  2794
Name:  ? Glyma.18G279400 Secondary Identifier:  ? PAC:30556249
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G279400 0.5kb upstream 0.5kb upstream 5154 true Chr18: 56036630-56041783 Glycine max
Glyma.18G279400 0.5kb upstream 0.5kb upstream 500 false Chr18: 56036630-56037129 Glycine max
Glyma.18G279400 0.5kb downstream 0.5kb downstream 5154 true Chr18: 56037130-56042283 Glycine max
Glyma.18G279400 0.5kb downstream 0.5kb downstream 500 false Chr18: 56041784-56042283 Glycine max
Glyma.18G279400 1.0kb upstream 1.0kb upstream 5654 true Chr18: 56036130-56041783 Glycine max
Glyma.18G279400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56036130-56037129 Glycine max
Glyma.18G279400 1.0kb downstream 1.0kb downstream 5654 true Chr18: 56037130-56042783 Glycine max
Glyma.18G279400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56041784-56042783 Glycine max
Glyma.18G279400 2.0kb upstream 2.0kb upstream 6654 true Chr18: 56035130-56041783 Glycine max
Glyma.18G279400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56035130-56037129 Glycine max
Glyma.18G279400 2.0kb downstream 2.0kb downstream 6654 true Chr18: 56037130-56043783 Glycine max
Glyma.18G279400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56041784-56043783 Glycine max
Glyma.18G279400 5.0kb upstream 5.0kb upstream 9654 true Chr18: 56032130-56041783 Glycine max
Glyma.18G279400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56032130-56037129 Glycine max
Glyma.18G279400 5.0kb downstream 5.0kb downstream 9654 true Chr18: 56037130-56046783 Glycine max
Glyma.18G279400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56041784-56046783 Glycine max
Glyma.18G279400 10.0kb upstream 10.0kb upstream 14654 true Chr18: 56027130-56041783 Glycine max
Glyma.18G279400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56027130-56037129 Glycine max
Glyma.18G279400 10.0kb downstream 10.0kb downstream 14654 true Chr18: 56037130-56051783 Glycine max
Glyma.18G279400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56041784-56051783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305690 5265 Fabidae View MSA
124068115 5270 Rosid View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03032 0.0 26.0625    
cufflinks 6.48108 0.0 20.7164    
cufflinks 7.75967 0.0 27.612    
cufflinks 9.31441 0.0 29.0984    
cufflinks 7.98898 0.0 29.5451    
cufflinks 6.66286 0.0 24.4571    
cufflinks 23.3478 0.0 74.5562 High High
cufflinks 8.84495 0.0 32.6094    
cufflinks 8.10032 0.0 29.4877    
cufflinks 1.767       High
cufflinks 0.579       Low
cufflinks 2.075       High
cufflinks 1.744       High
cufflinks 1.594       High
cufflinks 0.641        
cufflinks 0.687        
cufflinks 0.772        
cufflinks 2.352       High
cufflinks 1.231        
cufflinks 0.73        
cufflinks 0.682        
cufflinks 0.777        
cufflinks 0.707        
cufflinks 0.784        
cufflinks 0.725        
cufflinks 0.694        

0 Strain