Gene : Glyma.01G229300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13348 - RIBONUCLEASE P SUBUNIT P29 Genomic Order:  2293
Name:  ? Glyma.01G229300 Secondary Identifier:  ? PAC:30545244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G229300 0.5kb upstream 0.5kb upstream 2461 true Chr01: 55713111-55715571 Glycine max
Glyma.01G229300 0.5kb upstream 0.5kb upstream 500 false Chr01: 55715072-55715571 Glycine max
Glyma.01G229300 0.5kb downstream 0.5kb downstream 2461 true Chr01: 55712611-55715071 Glycine max
Glyma.01G229300 0.5kb downstream 0.5kb downstream 500 false Chr01: 55712611-55713110 Glycine max
Glyma.01G229300 1.0kb upstream 1.0kb upstream 2961 true Chr01: 55713111-55716071 Glycine max
Glyma.01G229300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55715072-55716071 Glycine max
Glyma.01G229300 1.0kb downstream 1.0kb downstream 2961 true Chr01: 55712111-55715071 Glycine max
Glyma.01G229300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55712111-55713110 Glycine max
Glyma.01G229300 2.0kb upstream 2.0kb upstream 3961 true Chr01: 55713111-55717071 Glycine max
Glyma.01G229300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55715072-55717071 Glycine max
Glyma.01G229300 2.0kb downstream 2.0kb downstream 3961 true Chr01: 55711111-55715071 Glycine max
Glyma.01G229300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55711111-55713110 Glycine max
Glyma.01G229300 5.0kb upstream 5.0kb upstream 6961 true Chr01: 55713111-55720071 Glycine max
Glyma.01G229300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55715072-55720071 Glycine max
Glyma.01G229300 5.0kb downstream 5.0kb downstream 6961 true Chr01: 55708111-55715071 Glycine max
Glyma.01G229300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55708111-55713110 Glycine max
Glyma.01G229300 10.0kb upstream 10.0kb upstream 11961 true Chr01: 55713111-55725071 Glycine max
Glyma.01G229300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55715072-55725071 Glycine max
Glyma.01G229300 10.0kb downstream 10.0kb downstream 11961 true Chr01: 55703111-55715071 Glycine max
Glyma.01G229300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55703111-55713110 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041354 5273 Angiosperm View MSA
122300689 5265 Fabidae View MSA
124061511 5270 Rosid View MSA
123737721 5271 Pentapetalae View MSA
122789849 5272 Eudicot View MSA
121347484 5274 Embryophyte View MSA
123427364 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.45805 0.0 5.38623   High
cufflinks 0.887803 0.0 3.35603    
cufflinks 0.891186 0.0 3.36459    
cufflinks 0.937024 0.0 3.53032    
cufflinks 0.900265 0.0 3.40196    
cufflinks 0.662328 0.0 2.53723   Low
cufflinks 0.957309 0.0 3.60719    
cufflinks 0.823382 0.0 3.12058    
cufflinks 0.703794 0.0 2.68783   Low
cufflinks 0.296        
cufflinks 0.174       Low
cufflinks 0.528        
cufflinks 0.602        
cufflinks 1.05       High
cufflinks 0.321        
cufflinks 0.437        
cufflinks 0.175       Low
cufflinks 0.631        
cufflinks 0.694       High
cufflinks 0.358        
cufflinks 0.237        
cufflinks 0.484        
cufflinks 0.532        
cufflinks 0.182       Low
cufflinks 0.318        
cufflinks 0.235        

0 Strain