Gene : Glyma.01G227000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11134//PTHR11134:SF14 - ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT Genomic Order:  2270
Name:  ? Glyma.01G227000 Secondary Identifier:  ? PAC:30544195
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G227000 0.5kb upstream 0.5kb upstream 7861 true Chr01: 55544527-55552387 Glycine max
Glyma.01G227000 0.5kb upstream 0.5kb upstream 500 false Chr01: 55544527-55545026 Glycine max
Glyma.01G227000 0.5kb downstream 0.5kb downstream 7861 true Chr01: 55545027-55552887 Glycine max
Glyma.01G227000 0.5kb downstream 0.5kb downstream 500 false Chr01: 55552388-55552887 Glycine max
Glyma.01G227000 1.0kb upstream 1.0kb upstream 8361 true Chr01: 55544027-55552387 Glycine max
Glyma.01G227000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55544027-55545026 Glycine max
Glyma.01G227000 1.0kb downstream 1.0kb downstream 8361 true Chr01: 55545027-55553387 Glycine max
Glyma.01G227000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55552388-55553387 Glycine max
Glyma.01G227000 2.0kb upstream 2.0kb upstream 9361 true Chr01: 55543027-55552387 Glycine max
Glyma.01G227000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55543027-55545026 Glycine max
Glyma.01G227000 2.0kb downstream 2.0kb downstream 9361 true Chr01: 55545027-55554387 Glycine max
Glyma.01G227000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55552388-55554387 Glycine max
Glyma.01G227000 5.0kb upstream 5.0kb upstream 12361 true Chr01: 55540027-55552387 Glycine max
Glyma.01G227000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55540027-55545026 Glycine max
Glyma.01G227000 5.0kb downstream 5.0kb downstream 12361 true Chr01: 55545027-55557387 Glycine max
Glyma.01G227000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55552388-55557387 Glycine max
Glyma.01G227000 10.0kb upstream 10.0kb upstream 17361 true Chr01: 55535027-55552387 Glycine max
Glyma.01G227000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55535027-55545026 Glycine max
Glyma.01G227000 10.0kb downstream 10.0kb downstream 17361 true Chr01: 55545027-55562387 Glycine max
Glyma.01G227000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55552388-55562387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311305 5265 Fabidae View MSA
124062772 5270 Rosid View MSA
123744505 5271 Pentapetalae View MSA
122790375 5272 Eudicot View MSA
122047828 5273 Angiosperm View MSA
121343872 5274 Embryophyte View MSA
123426129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.9067 0.0 72.4762 High  
cufflinks 17.392 0.0 47.1332   Low
cufflinks 28.0285 0.0 79.3243 High  
cufflinks 24.7789 0.0 69.1268 High  
cufflinks 24.7062 0.0 68.7839 High  
cufflinks 32.2709 0.0 92.7432 High High
cufflinks 19.9752 0.0 54.544   Low
cufflinks 27.2984 0.0 76.955 High  
cufflinks 23.3606 0.0 64.7292 High  
cufflinks 13.093     High  
cufflinks 12.425     High  
cufflinks 10.406     High  
cufflinks 13.635     High High
cufflinks 13.126     High  
cufflinks 8.35     High  
cufflinks 8.692     High  
cufflinks 9.93     High  
cufflinks 10.761     High  
cufflinks 10.89     High  
cufflinks 7.547     High Low
cufflinks 12.792     High  
cufflinks 8.268     High  
cufflinks 6.969       Low
cufflinks 14.541     High High
cufflinks 7.957     High Low
cufflinks 13.532     High High

0 Strain