Gene : Glyma.01G227300 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG0130 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) Genomic Order:  2273
Name:  ? Glyma.01G227300 Secondary Identifier:  ? PAC:30543425
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G227300 0.5kb upstream 0.5kb upstream 3424 true Chr01: 55578553-55581976 Glycine max
Glyma.01G227300 0.5kb upstream 0.5kb upstream 500 false Chr01: 55581477-55581976 Glycine max
Glyma.01G227300 0.5kb downstream 0.5kb downstream 3424 true Chr01: 55578053-55581476 Glycine max
Glyma.01G227300 0.5kb downstream 0.5kb downstream 500 false Chr01: 55578053-55578552 Glycine max
Glyma.01G227300 1.0kb upstream 1.0kb upstream 3924 true Chr01: 55578553-55582476 Glycine max
Glyma.01G227300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55581477-55582476 Glycine max
Glyma.01G227300 1.0kb downstream 1.0kb downstream 3924 true Chr01: 55577553-55581476 Glycine max
Glyma.01G227300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55577553-55578552 Glycine max
Glyma.01G227300 2.0kb upstream 2.0kb upstream 4924 true Chr01: 55578553-55583476 Glycine max
Glyma.01G227300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55581477-55583476 Glycine max
Glyma.01G227300 2.0kb downstream 2.0kb downstream 4924 true Chr01: 55576553-55581476 Glycine max
Glyma.01G227300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55576553-55578552 Glycine max
Glyma.01G227300 5.0kb upstream 5.0kb upstream 7924 true Chr01: 55578553-55586476 Glycine max
Glyma.01G227300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55581477-55586476 Glycine max
Glyma.01G227300 5.0kb downstream 5.0kb downstream 7924 true Chr01: 55573553-55581476 Glycine max
Glyma.01G227300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55573553-55578552 Glycine max
Glyma.01G227300 10.0kb upstream 10.0kb upstream 12924 true Chr01: 55578553-55591476 Glycine max
Glyma.01G227300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55581477-55591476 Glycine max
Glyma.01G227300 10.0kb downstream 10.0kb downstream 12924 true Chr01: 55568553-55581476 Glycine max
Glyma.01G227300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55568553-55578552 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302871 5265 Fabidae View MSA
124067815 5270 Rosid View MSA
123738959 5271 Pentapetalae View MSA
122793356 5272 Eudicot View MSA
122042715 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121347293 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2544 0.0 83.4863 High Low
cufflinks 36.8323 0.0 98.7552 High  
cufflinks 34.1358 0.0 91.2598 High  
cufflinks 31.536 0.0 84.2369 High Low
cufflinks 43.0842 0.0 116.547 High  
cufflinks 44.2259 0.0 119.658 High  
cufflinks 56.9757 0.0 156.774 High High
cufflinks 40.3589 0.0 108.605 High  
cufflinks 34.6983 0.0 92.921 High  
cufflinks 12.276     High  
cufflinks 10.135     High  
cufflinks 9.719     High Low
cufflinks 13.553     High  
cufflinks 14.577     High High
cufflinks 12.407     High  
cufflinks 13.902     High High
cufflinks 9.044     High Low
cufflinks 10.917     High  
cufflinks 16.213     High High
cufflinks 11.072     High  
cufflinks 11.082     High  
cufflinks 11.132     High  
cufflinks 13.237     High  
cufflinks 10.701     High  
cufflinks 11.985     High  
cufflinks 9.862     High Low

0 Strain