Gene : Glyma.01G231400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  2314
Name:  ? Glyma.01G231400 Secondary Identifier:  ? PAC:30542954
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G231400 0.5kb upstream 0.5kb upstream 4729 true Chr01: 55835887-55840615 Glycine max
Glyma.01G231400 0.5kb upstream 0.5kb upstream 500 false Chr01: 55835887-55836386 Glycine max
Glyma.01G231400 0.5kb downstream 0.5kb downstream 4729 true Chr01: 55836387-55841115 Glycine max
Glyma.01G231400 0.5kb downstream 0.5kb downstream 500 false Chr01: 55840616-55841115 Glycine max
Glyma.01G231400 1.0kb upstream 1.0kb upstream 5229 true Chr01: 55835387-55840615 Glycine max
Glyma.01G231400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55835387-55836386 Glycine max
Glyma.01G231400 1.0kb downstream 1.0kb downstream 5229 true Chr01: 55836387-55841615 Glycine max
Glyma.01G231400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55840616-55841615 Glycine max
Glyma.01G231400 2.0kb upstream 2.0kb upstream 6229 true Chr01: 55834387-55840615 Glycine max
Glyma.01G231400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55834387-55836386 Glycine max
Glyma.01G231400 2.0kb downstream 2.0kb downstream 6229 true Chr01: 55836387-55842615 Glycine max
Glyma.01G231400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55840616-55842615 Glycine max
Glyma.01G231400 5.0kb upstream 5.0kb upstream 9229 true Chr01: 55831387-55840615 Glycine max
Glyma.01G231400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55831387-55836386 Glycine max
Glyma.01G231400 5.0kb downstream 5.0kb downstream 9229 true Chr01: 55836387-55845615 Glycine max
Glyma.01G231400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55840616-55845615 Glycine max
Glyma.01G231400 10.0kb upstream 10.0kb upstream 14229 true Chr01: 55826387-55840615 Glycine max
Glyma.01G231400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55826387-55836386 Glycine max
Glyma.01G231400 10.0kb downstream 10.0kb downstream 14229 true Chr01: 55836387-55850615 Glycine max
Glyma.01G231400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55840616-55850615 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309221 5265 Fabidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.57644 0.0 20.5104    
cufflinks 5.73561 0.0 15.8237    
cufflinks 1.73635 0.0 5.54235   Low
cufflinks 4.13792 0.0 11.7578    
cufflinks 11.4768 0.0 30.6466   High
cufflinks 6.42989 0.0 17.5932    
cufflinks 4.75258 0.0 13.3505    
cufflinks 4.40694 0.0 12.4435    
cufflinks 7.18974 0.0 19.5329    
cufflinks 2.916        
cufflinks 1.216       Low
cufflinks 4.171        
cufflinks 12.238     High High
cufflinks 19.508     High High
cufflinks 2.747        
cufflinks 5.852        
cufflinks 2.962        
cufflinks 4.779        
cufflinks 5.615        
cufflinks 6.079        
cufflinks 1.574       Low
cufflinks 5.402        
cufflinks 5.361        
cufflinks 0.949       Low
cufflinks 5.98        
cufflinks 2.383        

0 Strain