Gene : Glyma.01G231000 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2310
Name:  ? Glyma.01G231000 Secondary Identifier:  ? PAC:30545221
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G231000 0.5kb upstream 0.5kb upstream 1112 true Chr01: 55816048-55817159 Glycine max
Glyma.01G231000 0.5kb upstream 0.5kb upstream 500 false Chr01: 55816660-55817159 Glycine max
Glyma.01G231000 0.5kb downstream 0.5kb downstream 1112 true Chr01: 55815548-55816659 Glycine max
Glyma.01G231000 0.5kb downstream 0.5kb downstream 500 false Chr01: 55815548-55816047 Glycine max
Glyma.01G231000 1.0kb upstream 1.0kb upstream 1612 true Chr01: 55816048-55817659 Glycine max
Glyma.01G231000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55816660-55817659 Glycine max
Glyma.01G231000 1.0kb downstream 1.0kb downstream 1612 true Chr01: 55815048-55816659 Glycine max
Glyma.01G231000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55815048-55816047 Glycine max
Glyma.01G231000 2.0kb upstream 2.0kb upstream 2612 true Chr01: 55816048-55818659 Glycine max
Glyma.01G231000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55816660-55818659 Glycine max
Glyma.01G231000 2.0kb downstream 2.0kb downstream 2612 true Chr01: 55814048-55816659 Glycine max
Glyma.01G231000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55814048-55816047 Glycine max
Glyma.01G231000 5.0kb upstream 5.0kb upstream 5612 true Chr01: 55816048-55821659 Glycine max
Glyma.01G231000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55816660-55821659 Glycine max
Glyma.01G231000 5.0kb downstream 5.0kb downstream 5612 true Chr01: 55811048-55816659 Glycine max
Glyma.01G231000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55811048-55816047 Glycine max
Glyma.01G231000 10.0kb upstream 10.0kb upstream 10612 true Chr01: 55816048-55826659 Glycine max
Glyma.01G231000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55816660-55826659 Glycine max
Glyma.01G231000 10.0kb downstream 10.0kb downstream 10612 true Chr01: 55806048-55816659 Glycine max
Glyma.01G231000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55806048-55816047 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312584 5265 Fabidae View MSA
124073354 5270 Rosid View MSA
123741897 5271 Pentapetalae View MSA
122793297 5272 Eudicot View MSA
122049485 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0783976 0.0 0.334091 Low Low
cufflinks 0.352247 0.0 1.39103    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.05434 0.0 14.0065    
cufflinks 3.53358 0.0 12.4017    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.540113 0.0 2.09592    
cufflinks 3.65855 0.0 12.8107    
cufflinks 22.395     High  
cufflinks 19.607     High  
cufflinks 1.457        
cufflinks 9.473     High  
cufflinks 0.129       Low
cufflinks 79.685     High High
cufflinks 1.694        
cufflinks 182.13     High High
cufflinks 0.915        
cufflinks 0.175       Low
cufflinks 0.507        
cufflinks 7.205     High  
cufflinks 0.374        
cufflinks 0.377        
cufflinks 8.259     High  
cufflinks 0.481        
cufflinks 28.986     High High

0 Strain