Gene : Glyma.18G281100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13946:SF28 - DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC2 Genomic Order:  2811
Name:  ? Glyma.18G281100 Secondary Identifier:  ? PAC:30555238
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G281100 0.5kb upstream 0.5kb upstream 2348 true Chr18: 56205967-56208314 Glycine max
Glyma.18G281100 0.5kb upstream 0.5kb upstream 500 false Chr18: 56205967-56206466 Glycine max
Glyma.18G281100 0.5kb downstream 0.5kb downstream 2348 true Chr18: 56206467-56208814 Glycine max
Glyma.18G281100 0.5kb downstream 0.5kb downstream 500 false Chr18: 56208315-56208814 Glycine max
Glyma.18G281100 1.0kb upstream 1.0kb upstream 2848 true Chr18: 56205467-56208314 Glycine max
Glyma.18G281100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 56205467-56206466 Glycine max
Glyma.18G281100 1.0kb downstream 1.0kb downstream 2848 true Chr18: 56206467-56209314 Glycine max
Glyma.18G281100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 56208315-56209314 Glycine max
Glyma.18G281100 2.0kb upstream 2.0kb upstream 3848 true Chr18: 56204467-56208314 Glycine max
Glyma.18G281100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 56204467-56206466 Glycine max
Glyma.18G281100 2.0kb downstream 2.0kb downstream 3848 true Chr18: 56206467-56210314 Glycine max
Glyma.18G281100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 56208315-56210314 Glycine max
Glyma.18G281100 5.0kb upstream 5.0kb upstream 6848 true Chr18: 56201467-56208314 Glycine max
Glyma.18G281100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 56201467-56206466 Glycine max
Glyma.18G281100 5.0kb downstream 5.0kb downstream 6848 true Chr18: 56206467-56213314 Glycine max
Glyma.18G281100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 56208315-56213314 Glycine max
Glyma.18G281100 10.0kb upstream 10.0kb upstream 11848 true Chr18: 56196467-56208314 Glycine max
Glyma.18G281100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 56196467-56206466 Glycine max
Glyma.18G281100 10.0kb downstream 10.0kb downstream 11848 true Chr18: 56206467-56218314 Glycine max
Glyma.18G281100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 56208315-56218314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302023 5265 Fabidae View MSA
124064164 5270 Rosid View MSA
123749269 5271 Pentapetalae View MSA
122790811 5272 Eudicot View MSA
122043921 5273 Angiosperm View MSA
121349469 5274 Embryophyte View MSA
123424853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1789 0.0 43.7796    
cufflinks 15.8418 0.0 45.3443    
cufflinks 11.996 0.0 35.426    
cufflinks 15.8963 0.0 45.4074    
cufflinks 23.8585 0.0 65.6188 High  
cufflinks 24.8217 0.0 68.0874 High  
cufflinks 90.5876 0.0 245.344 High High
cufflinks 16.311 0.0 46.5021    
cufflinks 26.5574 0.0 72.4494 High  
cufflinks 3.767       Low
cufflinks 8.308     High  
cufflinks 5.148        
cufflinks 9.099     High  
cufflinks 11.511     High High
cufflinks 8.924     High  
cufflinks 6.92        
cufflinks 4.232       Low
cufflinks 6.957        
cufflinks 4.676       Low
cufflinks 8.095     High  
cufflinks 7.906     High  
cufflinks 6.245        
cufflinks 4.078       Low
cufflinks 11.404     High High
cufflinks 7.859     High  
cufflinks 5.475        

0 Strain