Gene : Glyma.01G235200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10887:SF362 - RNA HELICASE SDE3-RELATED Genomic Order:  2352
Name:  ? Glyma.01G235200 Secondary Identifier:  ? PAC:30541506
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G235200 0.5kb upstream 0.5kb upstream 7384 true Chr01: 56103784-56111167 Glycine max
Glyma.01G235200 0.5kb upstream 0.5kb upstream 500 false Chr01: 56110668-56111167 Glycine max
Glyma.01G235200 0.5kb downstream 0.5kb downstream 7384 true Chr01: 56103284-56110667 Glycine max
Glyma.01G235200 0.5kb downstream 0.5kb downstream 500 false Chr01: 56103284-56103783 Glycine max
Glyma.01G235200 1.0kb upstream 1.0kb upstream 7884 true Chr01: 56103784-56111667 Glycine max
Glyma.01G235200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56110668-56111667 Glycine max
Glyma.01G235200 1.0kb downstream 1.0kb downstream 7884 true Chr01: 56102784-56110667 Glycine max
Glyma.01G235200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56102784-56103783 Glycine max
Glyma.01G235200 2.0kb upstream 2.0kb upstream 8884 true Chr01: 56103784-56112667 Glycine max
Glyma.01G235200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56110668-56112667 Glycine max
Glyma.01G235200 2.0kb downstream 2.0kb downstream 8884 true Chr01: 56101784-56110667 Glycine max
Glyma.01G235200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56101784-56103783 Glycine max
Glyma.01G235200 5.0kb upstream 5.0kb upstream 11884 true Chr01: 56103784-56115667 Glycine max
Glyma.01G235200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56110668-56115667 Glycine max
Glyma.01G235200 5.0kb downstream 5.0kb downstream 11884 true Chr01: 56098784-56110667 Glycine max
Glyma.01G235200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56098784-56103783 Glycine max
Glyma.01G235200 10.0kb upstream 10.0kb upstream 16884 true Chr01: 56103784-56120667 Glycine max
Glyma.01G235200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56110668-56120667 Glycine max
Glyma.01G235200 10.0kb downstream 10.0kb downstream 16884 true Chr01: 56093784-56110667 Glycine max
Glyma.01G235200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56093784-56103783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302963 5265 Fabidae View MSA
124064664 5270 Rosid View MSA
123747903 5271 Pentapetalae View MSA
122786159 5272 Eudicot View MSA
122043025 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121348159 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.70368 0.0 22.4629    
cufflinks 7.78391 0.0 29.7785   High
cufflinks 4.85214 0.0 19.7785   Low
cufflinks 7.58246 0.0 29.1273    
cufflinks 7.0109 0.0 27.0774    
cufflinks 5.08992 0.0 18.2559   Low
cufflinks 7.13654 0.0 27.6458    
cufflinks 7.21349 0.0 29.2961    
cufflinks 6.49438 0.0 25.154    
cufflinks 0.944        
cufflinks 0.264       Low
cufflinks 0.921        
cufflinks 1.2       High
cufflinks 1.281       High
cufflinks 0.391       Low
cufflinks 0.846        
cufflinks 0.415       Low
cufflinks 1.015        
cufflinks 1.43       High
cufflinks 0.816        
cufflinks 0.432        
cufflinks 0.899        
cufflinks 1.075        
cufflinks 0.384       Low
cufflinks 0.763        
cufflinks 0.4       Low

0 Strain