Gene : Glyma.01G239600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23024//PTHR23024:SF196 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES Genomic Order:  2396
Name:  ? Glyma.01G239600 Secondary Identifier:  ? PAC:30541802
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2002 Glycine max pathologic  
Gmax PWY-2083 Glycine max pathologic  
Gmax PWY-2229 Glycine max pathologic  
Gmax PWY-2321 Glycine max pathologic  
Gmax PWY-6303 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G239600 0.5kb upstream 0.5kb upstream 2282 true Chr01: 56366573-56368854 Glycine max
Glyma.01G239600 0.5kb upstream 0.5kb upstream 500 false Chr01: 56366573-56367072 Glycine max
Glyma.01G239600 0.5kb downstream 0.5kb downstream 2282 true Chr01: 56367073-56369354 Glycine max
Glyma.01G239600 0.5kb downstream 0.5kb downstream 500 false Chr01: 56368855-56369354 Glycine max
Glyma.01G239600 1.0kb upstream 1.0kb upstream 2782 true Chr01: 56366073-56368854 Glycine max
Glyma.01G239600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56366073-56367072 Glycine max
Glyma.01G239600 1.0kb downstream 1.0kb downstream 2782 true Chr01: 56367073-56369854 Glycine max
Glyma.01G239600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56368855-56369854 Glycine max
Glyma.01G239600 2.0kb upstream 2.0kb upstream 3782 true Chr01: 56365073-56368854 Glycine max
Glyma.01G239600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56365073-56367072 Glycine max
Glyma.01G239600 2.0kb downstream 2.0kb downstream 3782 true Chr01: 56367073-56370854 Glycine max
Glyma.01G239600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56368855-56370854 Glycine max
Glyma.01G239600 5.0kb upstream 5.0kb upstream 6782 true Chr01: 56362073-56368854 Glycine max
Glyma.01G239600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56362073-56367072 Glycine max
Glyma.01G239600 5.0kb downstream 5.0kb downstream 6782 true Chr01: 56367073-56373854 Glycine max
Glyma.01G239600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56368855-56373854 Glycine max
Glyma.01G239600 10.0kb upstream 10.0kb upstream 11782 true Chr01: 56357073-56368854 Glycine max
Glyma.01G239600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56357073-56367072 Glycine max
Glyma.01G239600 10.0kb downstream 10.0kb downstream 11782 true Chr01: 56367073-56378854 Glycine max
Glyma.01G239600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56368855-56378854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316201 5265 Fabidae View MSA
124074680 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 138.77 0.0 453.216 High High
cufflinks 18.7116 0.0 49.9326    
cufflinks 53.5472 0.0 150.386 High  
cufflinks 17.6495 0.0 47.1209    
cufflinks 136.653 0.0 446.924 High High
cufflinks 108.006 0.0 337.139 High  
cufflinks 8.90262 0.0 24.5113   Low
cufflinks 13.0893 0.0 35.2142   Low
cufflinks 95.6512 0.0 292.383 High  
cufflinks 7.939     High Low
cufflinks 84.004     High  
cufflinks 20.86     High  
cufflinks 120.54     High  
cufflinks 64.839     High  
cufflinks 59.383     High  
cufflinks 12.511     High  
cufflinks 279.65     High High
cufflinks 5.767       Low
cufflinks 21.433     High  
cufflinks 13.516     High  
cufflinks 131.45     High  
cufflinks 23.618     High  
cufflinks 21.806     High  
cufflinks 250.694     High High
cufflinks 9.868     High Low
cufflinks 184.333     High High

0 Strain