Gene : Glyma.01G245400 G. max Wm82.a2.v1
Defline:  (1 of 14) PF02151 - UvrB/uvrC motif (UVR) Genomic Order:  2454
Name:  ? Glyma.01G245400 Secondary Identifier:  ? PAC:30541751
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G245400 0.5kb upstream 0.5kb upstream 4793 true Chr01: 56776892-56781684 Glycine max
Glyma.01G245400 0.5kb upstream 0.5kb upstream 500 false Chr01: 56781185-56781684 Glycine max
Glyma.01G245400 0.5kb downstream 0.5kb downstream 4793 true Chr01: 56776392-56781184 Glycine max
Glyma.01G245400 0.5kb downstream 0.5kb downstream 500 false Chr01: 56776392-56776891 Glycine max
Glyma.01G245400 1.0kb upstream 1.0kb upstream 5293 true Chr01: 56776892-56782184 Glycine max
Glyma.01G245400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56781185-56782184 Glycine max
Glyma.01G245400 1.0kb downstream 1.0kb downstream 5293 true Chr01: 56775892-56781184 Glycine max
Glyma.01G245400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56775892-56776891 Glycine max
Glyma.01G245400 2.0kb upstream 2.0kb upstream 6293 true Chr01: 56776892-56783184 Glycine max
Glyma.01G245400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56781185-56783184 Glycine max
Glyma.01G245400 2.0kb downstream 2.0kb downstream 6293 true Chr01: 56774892-56781184 Glycine max
Glyma.01G245400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56774892-56776891 Glycine max
Glyma.01G245400 5.0kb upstream 5.0kb upstream 9293 true Chr01: 56776892-56786184 Glycine max
Glyma.01G245400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56781185-56786184 Glycine max
Glyma.01G245400 5.0kb downstream 5.0kb downstream 9293 true Chr01: 56771892-56781184 Glycine max
Glyma.01G245400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56771892-56776891 Glycine max
Glyma.01G245400 10.0kb upstream 10.0kb upstream 14293 true Chr01: 56776892-56791184 Glycine max
Glyma.01G245400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56781185-56791184 Glycine max
Glyma.01G245400 10.0kb downstream 10.0kb downstream 14293 true Chr01: 56766892-56781184 Glycine max
Glyma.01G245400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56766892-56776891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026530 5273 Angiosperm View MSA
122300381 5265 Fabidae View MSA
124068413 5270 Rosid View MSA
123741564 5271 Pentapetalae View MSA
122791830 5272 Eudicot View MSA
121343940 5274 Embryophyte View MSA
123379943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.98842 0.0 18.7911    
cufflinks 6.73731 0.0 18.1331    
cufflinks 5.27973 0.0 14.3844   Low
cufflinks 8.29581 0.0 22.177    
cufflinks 9.69071 0.0 25.8589   High
cufflinks 8.40067 0.0 22.4565    
cufflinks 6.07383 0.0 16.4641   Low
cufflinks 8.9634 0.0 23.9316    
cufflinks 8.30044 0.0 22.1953    
cufflinks 6.27        
cufflinks 1.703       Low
cufflinks 5.146        
cufflinks 8.022     High High
cufflinks 9.813     High High
cufflinks 2.115       Low
cufflinks 4.698        
cufflinks 2.203       Low
cufflinks 5.692        
cufflinks 5.642        
cufflinks 4.769        
cufflinks 3.032        
cufflinks 4.673        
cufflinks 4.034        
cufflinks 2.799        
cufflinks 4.743        
cufflinks 3.286        

0 Strain