Gene : Glyma.01G244900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11851:SF68 - PRESEQUENCE PROTEASE 1, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  2449
Name:  ? Glyma.01G244900 Secondary Identifier:  ? PAC:30543120
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G244900 0.5kb upstream 0.5kb upstream 10097 true Chr01: 56726966-56737062 Glycine max
Glyma.01G244900 0.5kb upstream 0.5kb upstream 500 false Chr01: 56736563-56737062 Glycine max
Glyma.01G244900 0.5kb downstream 0.5kb downstream 10097 true Chr01: 56726466-56736562 Glycine max
Glyma.01G244900 0.5kb downstream 0.5kb downstream 500 false Chr01: 56726466-56726965 Glycine max
Glyma.01G244900 1.0kb upstream 1.0kb upstream 10597 true Chr01: 56726966-56737562 Glycine max
Glyma.01G244900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56736563-56737562 Glycine max
Glyma.01G244900 1.0kb downstream 1.0kb downstream 10597 true Chr01: 56725966-56736562 Glycine max
Glyma.01G244900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56725966-56726965 Glycine max
Glyma.01G244900 2.0kb upstream 2.0kb upstream 11597 true Chr01: 56726966-56738562 Glycine max
Glyma.01G244900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56736563-56738562 Glycine max
Glyma.01G244900 2.0kb downstream 2.0kb downstream 11597 true Chr01: 56724966-56736562 Glycine max
Glyma.01G244900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56724966-56726965 Glycine max
Glyma.01G244900 5.0kb upstream 5.0kb upstream 14597 true Chr01: 56726966-56741562 Glycine max
Glyma.01G244900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56736563-56741562 Glycine max
Glyma.01G244900 5.0kb downstream 5.0kb downstream 14597 true Chr01: 56721966-56736562 Glycine max
Glyma.01G244900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56721966-56726965 Glycine max
Glyma.01G244900 10.0kb upstream 10.0kb upstream 19597 true Chr01: 56726966-56746562 Glycine max
Glyma.01G244900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56736563-56746562 Glycine max
Glyma.01G244900 10.0kb downstream 10.0kb downstream 19597 true Chr01: 56716966-56736562 Glycine max
Glyma.01G244900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56716966-56726965 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300924 5265 Fabidae View MSA
124061044 5270 Rosid View MSA
123737107 5271 Pentapetalae View MSA
122792792 5272 Eudicot View MSA
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.9373 0.0 284.504 High High
cufflinks 33.1441 0.0 97.2339 High  
cufflinks 42.3484 0.0 129.49 High  
cufflinks 21.8037 0.0 60.8261 High  
cufflinks 21.394 0.0 59.4565 High  
cufflinks 14.5798 0.0 39.4102   Low
cufflinks 21.0429 0.0 58.3359    
cufflinks 21.1297 0.0 58.7739 High  
cufflinks 15.2744 0.0 41.3938    
cufflinks 9.367     High  
cufflinks 2.365       Low
cufflinks 14.043     High  
cufflinks 9.571     High  
cufflinks 10.998     High  
cufflinks 3.62       Low
cufflinks 32.251     High High
cufflinks 4.337        
cufflinks 10.902     High  
cufflinks 16.477     High  
cufflinks 34.275     High High
cufflinks 2.836       Low
cufflinks 33.13     High High
cufflinks 23.476     High  
cufflinks 3.036       Low
cufflinks 33.113     High High
cufflinks 4.284        

0 Strain