Gene : Glyma.18G272400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33417:SF1 - B12D PROTEIN Genomic Order:  2724
Name:  ? Glyma.18G272400 Secondary Identifier:  ? PAC:30558137
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G272400 0.5kb upstream 0.5kb upstream 1486 true Chr18: 55551452-55552937 Glycine max
Glyma.18G272400 0.5kb upstream 0.5kb upstream 500 false Chr18: 55552438-55552937 Glycine max
Glyma.18G272400 0.5kb downstream 0.5kb downstream 1486 true Chr18: 55550952-55552437 Glycine max
Glyma.18G272400 0.5kb downstream 0.5kb downstream 500 false Chr18: 55550952-55551451 Glycine max
Glyma.18G272400 1.0kb upstream 1.0kb upstream 1986 true Chr18: 55551452-55553437 Glycine max
Glyma.18G272400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55552438-55553437 Glycine max
Glyma.18G272400 1.0kb downstream 1.0kb downstream 1986 true Chr18: 55550452-55552437 Glycine max
Glyma.18G272400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55550452-55551451 Glycine max
Glyma.18G272400 2.0kb upstream 2.0kb upstream 2986 true Chr18: 55551452-55554437 Glycine max
Glyma.18G272400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55552438-55554437 Glycine max
Glyma.18G272400 2.0kb downstream 2.0kb downstream 2986 true Chr18: 55549452-55552437 Glycine max
Glyma.18G272400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55549452-55551451 Glycine max
Glyma.18G272400 5.0kb upstream 5.0kb upstream 5986 true Chr18: 55551452-55557437 Glycine max
Glyma.18G272400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55552438-55557437 Glycine max
Glyma.18G272400 5.0kb downstream 5.0kb downstream 5986 true Chr18: 55546452-55552437 Glycine max
Glyma.18G272400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55546452-55551451 Glycine max
Glyma.18G272400 10.0kb upstream 10.0kb upstream 10986 true Chr18: 55551452-55562437 Glycine max
Glyma.18G272400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55552438-55562437 Glycine max
Glyma.18G272400 10.0kb downstream 10.0kb downstream 10986 true Chr18: 55541452-55552437 Glycine max
Glyma.18G272400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55541452-55551451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304540 5265 Fabidae View MSA
124062890 5270 Rosid View MSA
123738615 5271 Pentapetalae View MSA
122769927 5272 Eudicot View MSA
122048114 5273 Angiosperm View MSA
121310851 5274 Embryophyte View MSA
123348236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33068 0.0 4.99122    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.166921 0.0 0.681749 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 24.4798 0.0 68.4041 High High
cufflinks 0.577857 0.0 2.24821    
cufflinks 0.077388 0.0 0.333303 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 62.0998 0.0 165.681 High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 49.804     High High
cufflinks 0.016     Low Low
cufflinks 0.104        
cufflinks 2.367        
cufflinks 46.365     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.723        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 18.643     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low Low
cufflinks 29.95     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.46     High  

0 Strain