Gene : Glyma.01G185600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1856
Name:  ? Glyma.01G185600 Secondary Identifier:  ? PAC:30543672
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G185600 0.5kb upstream 0.5kb upstream 1559 true Chr01: 52105759-52107317 Glycine max
Glyma.01G185600 0.5kb upstream 0.5kb upstream 500 false Chr01: 52106818-52107317 Glycine max
Glyma.01G185600 0.5kb downstream 0.5kb downstream 1559 true Chr01: 52105259-52106817 Glycine max
Glyma.01G185600 0.5kb downstream 0.5kb downstream 500 false Chr01: 52105259-52105758 Glycine max
Glyma.01G185600 1.0kb upstream 1.0kb upstream 2059 true Chr01: 52105759-52107817 Glycine max
Glyma.01G185600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52106818-52107817 Glycine max
Glyma.01G185600 1.0kb downstream 1.0kb downstream 2059 true Chr01: 52104759-52106817 Glycine max
Glyma.01G185600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52104759-52105758 Glycine max
Glyma.01G185600 2.0kb upstream 2.0kb upstream 3059 true Chr01: 52105759-52108817 Glycine max
Glyma.01G185600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52106818-52108817 Glycine max
Glyma.01G185600 2.0kb downstream 2.0kb downstream 3059 true Chr01: 52103759-52106817 Glycine max
Glyma.01G185600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52103759-52105758 Glycine max
Glyma.01G185600 5.0kb upstream 5.0kb upstream 6059 true Chr01: 52105759-52111817 Glycine max
Glyma.01G185600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52106818-52111817 Glycine max
Glyma.01G185600 5.0kb downstream 5.0kb downstream 6059 true Chr01: 52100759-52106817 Glycine max
Glyma.01G185600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52100759-52105758 Glycine max
Glyma.01G185600 10.0kb upstream 10.0kb upstream 11059 true Chr01: 52105759-52116817 Glycine max
Glyma.01G185600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52106818-52116817 Glycine max
Glyma.01G185600 10.0kb downstream 10.0kb downstream 11059 true Chr01: 52095759-52106817 Glycine max
Glyma.01G185600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52095759-52105758 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307758 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0899 0.0 31.1573   High
cufflinks 2.922 0.0 9.7726    
cufflinks 10.7127 0.0 30.0125   High
cufflinks 3.62258 0.0 11.7638    
cufflinks 3.7365 0.0 12.1457    
cufflinks 0.703835 0.0 2.6263   Low
cufflinks 0.573415 0.0 2.16066   Low
cufflinks 4.77554 0.0 14.9148    
cufflinks 5.51014 0.0 16.8918    
cufflinks 7.128        
cufflinks 34.963     High High
cufflinks 7.261     High  
cufflinks 3.362        
cufflinks 0.413       Low
cufflinks 2.735        
cufflinks 2.742        
cufflinks 36.757     High High
cufflinks 16.769     High  
cufflinks 2.301        
cufflinks 1.608        
cufflinks 47.592     High High
cufflinks 2.889        
cufflinks 1.486       Low
cufflinks 38.77     High High
cufflinks 2.812        
cufflinks 27.032     High High

0 Strain