Gene : Glyma.18G273600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Genomic Order:  2736
Name:  ? Glyma.18G273600 Secondary Identifier:  ? PAC:30557241
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G273600 0.5kb upstream 0.5kb upstream 8839 true Chr18: 55637709-55646547 Glycine max
Glyma.18G273600 0.5kb upstream 0.5kb upstream 500 false Chr18: 55637709-55638208 Glycine max
Glyma.18G273600 0.5kb downstream 0.5kb downstream 8839 true Chr18: 55638209-55647047 Glycine max
Glyma.18G273600 0.5kb downstream 0.5kb downstream 500 false Chr18: 55646548-55647047 Glycine max
Glyma.18G273600 1.0kb upstream 1.0kb upstream 9339 true Chr18: 55637209-55646547 Glycine max
Glyma.18G273600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55637209-55638208 Glycine max
Glyma.18G273600 1.0kb downstream 1.0kb downstream 9339 true Chr18: 55638209-55647547 Glycine max
Glyma.18G273600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55646548-55647547 Glycine max
Glyma.18G273600 2.0kb upstream 2.0kb upstream 10339 true Chr18: 55636209-55646547 Glycine max
Glyma.18G273600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55636209-55638208 Glycine max
Glyma.18G273600 2.0kb downstream 2.0kb downstream 10339 true Chr18: 55638209-55648547 Glycine max
Glyma.18G273600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55646548-55648547 Glycine max
Glyma.18G273600 5.0kb upstream 5.0kb upstream 13339 true Chr18: 55633209-55646547 Glycine max
Glyma.18G273600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55633209-55638208 Glycine max
Glyma.18G273600 5.0kb downstream 5.0kb downstream 13339 true Chr18: 55638209-55651547 Glycine max
Glyma.18G273600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55646548-55651547 Glycine max
Glyma.18G273600 10.0kb upstream 10.0kb upstream 18339 true Chr18: 55628209-55646547 Glycine max
Glyma.18G273600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55628209-55638208 Glycine max
Glyma.18G273600 10.0kb downstream 10.0kb downstream 18339 true Chr18: 55638209-55656547 Glycine max
Glyma.18G273600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55646548-55656547 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122314774 5265 Fabidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.599671 0.0 2.25639   High
cufflinks 0.290183 0.0 1.12706    
cufflinks 0.0132799 0.0 0.0628305 Low Low
cufflinks 0.0227143 0.0 0.101924 Low Low
cufflinks 0.176787 0.0 0.698877 Low  
cufflinks 0.0793229 0.0 0.324314 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.122693 0.0 0.491331 Low  
cufflinks 0.230844 0.0 0.904081 Low  
cufflinks 0.018     Low  
cufflinks 0.002     Low Low
cufflinks 0.014     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.149       High
cufflinks 0.037     Low  
cufflinks 0.037     Low  
cufflinks 0.034     Low  
cufflinks 0.09     Low  
cufflinks 0.012     Low  
cufflinks 0.086     Low  
cufflinks 0.145       High
cufflinks 0.009     Low  
cufflinks 0.161       High
cufflinks 0.036     Low  

0 Strain