Gene : Glyma.01G190800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13683//PTHR13683:SF342 - ASPARTYL PROTEASES Genomic Order:  1908
Name:  ? Glyma.01G190800 Secondary Identifier:  ? PAC:30542151
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G190800 0.5kb upstream 0.5kb upstream 6130 true Chr01: 52546224-52552353 Glycine max
Glyma.01G190800 0.5kb upstream 0.5kb upstream 500 false Chr01: 52546224-52546723 Glycine max
Glyma.01G190800 0.5kb downstream 0.5kb downstream 6130 true Chr01: 52546724-52552853 Glycine max
Glyma.01G190800 0.5kb downstream 0.5kb downstream 500 false Chr01: 52552354-52552853 Glycine max
Glyma.01G190800 1.0kb upstream 1.0kb upstream 6630 true Chr01: 52545724-52552353 Glycine max
Glyma.01G190800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52545724-52546723 Glycine max
Glyma.01G190800 1.0kb downstream 1.0kb downstream 6630 true Chr01: 52546724-52553353 Glycine max
Glyma.01G190800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52552354-52553353 Glycine max
Glyma.01G190800 2.0kb upstream 2.0kb upstream 7630 true Chr01: 52544724-52552353 Glycine max
Glyma.01G190800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52544724-52546723 Glycine max
Glyma.01G190800 2.0kb downstream 2.0kb downstream 7630 true Chr01: 52546724-52554353 Glycine max
Glyma.01G190800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52552354-52554353 Glycine max
Glyma.01G190800 5.0kb upstream 5.0kb upstream 10630 true Chr01: 52541724-52552353 Glycine max
Glyma.01G190800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52541724-52546723 Glycine max
Glyma.01G190800 5.0kb downstream 5.0kb downstream 10630 true Chr01: 52546724-52557353 Glycine max
Glyma.01G190800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52552354-52557353 Glycine max
Glyma.01G190800 10.0kb upstream 10.0kb upstream 15630 true Chr01: 52536724-52552353 Glycine max
Glyma.01G190800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52536724-52546723 Glycine max
Glyma.01G190800 10.0kb downstream 10.0kb downstream 15630 true Chr01: 52546724-52562353 Glycine max
Glyma.01G190800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52552354-52562353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297513 5265 Fabidae View MSA
124072520 5270 Rosid View MSA
123741714 5271 Pentapetalae View MSA
122786782 5272 Eudicot View MSA
122041856 5273 Angiosperm View MSA
121346441 5274 Embryophyte View MSA
123428674 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13599 0.0 12.1316   High
cufflinks 2.40226 0.0 7.60269   Low
cufflinks 4.41971 0.0 12.8252   High
cufflinks 4.74323 0.0 13.6654   High
cufflinks 2.62358 0.0 8.19503    
cufflinks 2.39206 0.0 7.56519   Low
cufflinks 2.67283 0.0 8.34972    
cufflinks 2.91963 0.0 8.98065    
cufflinks 2.95864 0.0 9.07962    
cufflinks 1.057        
cufflinks 0.761       Low
cufflinks 1.618       High
cufflinks 1.203        
cufflinks 1.314        
cufflinks 1.26        
cufflinks 1.149        
cufflinks 0.785       Low
cufflinks 1.562       High
cufflinks 1.372        
cufflinks 1.135        
cufflinks 0.946        
cufflinks 1.383        
cufflinks 1.088        
cufflinks 1.008        
cufflinks 1.103        
cufflinks 0.932        

0 Strain