Gene : Glyma.01G189800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11711//PTHR11711:SF184 - ADP RIBOSYLATION FACTOR-RELATED Genomic Order:  1898
Name:  ? Glyma.01G189800 Secondary Identifier:  ? PAC:30543453
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G189800 0.5kb upstream 0.5kb upstream 2961 true Chr01: 52471826-52474786 Glycine max
Glyma.01G189800 0.5kb upstream 0.5kb upstream 500 false Chr01: 52474287-52474786 Glycine max
Glyma.01G189800 0.5kb downstream 0.5kb downstream 2961 true Chr01: 52471326-52474286 Glycine max
Glyma.01G189800 0.5kb downstream 0.5kb downstream 500 false Chr01: 52471326-52471825 Glycine max
Glyma.01G189800 1.0kb upstream 1.0kb upstream 3461 true Chr01: 52471826-52475286 Glycine max
Glyma.01G189800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52474287-52475286 Glycine max
Glyma.01G189800 1.0kb downstream 1.0kb downstream 3461 true Chr01: 52470826-52474286 Glycine max
Glyma.01G189800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52470826-52471825 Glycine max
Glyma.01G189800 2.0kb upstream 2.0kb upstream 4461 true Chr01: 52471826-52476286 Glycine max
Glyma.01G189800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52474287-52476286 Glycine max
Glyma.01G189800 2.0kb downstream 2.0kb downstream 4461 true Chr01: 52469826-52474286 Glycine max
Glyma.01G189800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52469826-52471825 Glycine max
Glyma.01G189800 5.0kb upstream 5.0kb upstream 7461 true Chr01: 52471826-52479286 Glycine max
Glyma.01G189800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52474287-52479286 Glycine max
Glyma.01G189800 5.0kb downstream 5.0kb downstream 7461 true Chr01: 52466826-52474286 Glycine max
Glyma.01G189800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52466826-52471825 Glycine max
Glyma.01G189800 10.0kb upstream 10.0kb upstream 12461 true Chr01: 52471826-52484286 Glycine max
Glyma.01G189800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52474287-52484286 Glycine max
Glyma.01G189800 10.0kb downstream 10.0kb downstream 12461 true Chr01: 52461826-52474286 Glycine max
Glyma.01G189800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52461826-52471825 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304235 5265 Fabidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.40818 0.0 42.9598   High
cufflinks 0.716039 0.0 5.45878    
cufflinks 6.47611 0.0 35.6558   High
cufflinks 2.35287 0.0 19.331    
cufflinks 1.33489 0.0 10.7758    
cufflinks 0.280628 0.0 1.0922 Low Low
cufflinks 0.679465 0.0 3.36103    
cufflinks 5.95884 0.0 30.4199    
cufflinks 2.23918 0.0 14.1052    
cufflinks 0.309        
cufflinks 0.072        
cufflinks 0.559       High
cufflinks 0.087     Low  
cufflinks 0.003     Low Low
cufflinks 0.005     Low Low
cufflinks 0.044     Low  
cufflinks 0.335       High
cufflinks 0.645       High
cufflinks 0.049     Low  
cufflinks 0.047     Low  
cufflinks 0.103        
cufflinks 0.052     Low  
cufflinks 0.044     Low  
cufflinks 0.075        
cufflinks 0.073     Low  
cufflinks 0.172        

0 Strain