Gene : Glyma.01G188800 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR11926//PTHR11926:SF384 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  1888
Name:  ? Glyma.01G188800 Secondary Identifier:  ? PAC:30544024
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5203 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G188800 0.5kb upstream 0.5kb upstream 1932 true Chr01: 52402673-52404604 Glycine max
Glyma.01G188800 0.5kb upstream 0.5kb upstream 500 false Chr01: 52402673-52403172 Glycine max
Glyma.01G188800 0.5kb downstream 0.5kb downstream 1932 true Chr01: 52403173-52405104 Glycine max
Glyma.01G188800 0.5kb downstream 0.5kb downstream 500 false Chr01: 52404605-52405104 Glycine max
Glyma.01G188800 1.0kb upstream 1.0kb upstream 2432 true Chr01: 52402173-52404604 Glycine max
Glyma.01G188800 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52402173-52403172 Glycine max
Glyma.01G188800 1.0kb downstream 1.0kb downstream 2432 true Chr01: 52403173-52405604 Glycine max
Glyma.01G188800 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52404605-52405604 Glycine max
Glyma.01G188800 2.0kb upstream 2.0kb upstream 3432 true Chr01: 52401173-52404604 Glycine max
Glyma.01G188800 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52401173-52403172 Glycine max
Glyma.01G188800 2.0kb downstream 2.0kb downstream 3432 true Chr01: 52403173-52406604 Glycine max
Glyma.01G188800 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52404605-52406604 Glycine max
Glyma.01G188800 5.0kb upstream 5.0kb upstream 6432 true Chr01: 52398173-52404604 Glycine max
Glyma.01G188800 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52398173-52403172 Glycine max
Glyma.01G188800 5.0kb downstream 5.0kb downstream 6432 true Chr01: 52403173-52409604 Glycine max
Glyma.01G188800 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52404605-52409604 Glycine max
Glyma.01G188800 10.0kb upstream 10.0kb upstream 11432 true Chr01: 52393173-52404604 Glycine max
Glyma.01G188800 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52393173-52403172 Glycine max
Glyma.01G188800 10.0kb downstream 10.0kb downstream 11432 true Chr01: 52403173-52414604 Glycine max
Glyma.01G188800 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52404605-52414604 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029969 5273 Angiosperm View MSA
122248039 5265 Fabidae Singleton cluster - no MSA
123991703 5270 Rosid Singleton cluster - no MSA
123754099 5271 Pentapetalae View MSA
122775511 5272 Eudicot View MSA
121299213 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.200427 0.0 0.777498 Low  
cufflinks 1.98627 0.0 6.68886   High
cufflinks 0.0553221 0.0 0.22595 Low Low
cufflinks 0.658116 0.0 2.41704    
cufflinks 0.510661 0.0 1.8977    
cufflinks 0.240065 0.0 0.923921 Low  
cufflinks 1.53599 0.0 5.29839   High
cufflinks 0.227379 0.0 0.877238 Low  
cufflinks 0.356822 0.0 1.3495    
cufflinks 0.125        
cufflinks 0.012     Low Low
cufflinks 0.985        
cufflinks 0.109        
cufflinks 0.26        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.411        
cufflinks 0.092        
cufflinks 1.23        
cufflinks 4.028       High
cufflinks 1.075        
cufflinks 0.034     Low Low
cufflinks 1.279        
cufflinks 3.495       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.035        
cufflinks 0.02     Low Low

0 Strain