Gene : Glyma.01G189300 G. max Wm82.a2.v1
Defline:  (1 of 70) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  1893
Name:  ? Glyma.01G189300 Secondary Identifier:  ? PAC:30542191
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G189300 0.5kb upstream 0.5kb upstream 2346 true Chr01: 52441820-52444165 Glycine max
Glyma.01G189300 0.5kb upstream 0.5kb upstream 500 false Chr01: 52441820-52442319 Glycine max
Glyma.01G189300 0.5kb downstream 0.5kb downstream 2346 true Chr01: 52442320-52444665 Glycine max
Glyma.01G189300 0.5kb downstream 0.5kb downstream 500 false Chr01: 52444166-52444665 Glycine max
Glyma.01G189300 1.0kb upstream 1.0kb upstream 2846 true Chr01: 52441320-52444165 Glycine max
Glyma.01G189300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52441320-52442319 Glycine max
Glyma.01G189300 1.0kb downstream 1.0kb downstream 2846 true Chr01: 52442320-52445165 Glycine max
Glyma.01G189300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52444166-52445165 Glycine max
Glyma.01G189300 2.0kb upstream 2.0kb upstream 3846 true Chr01: 52440320-52444165 Glycine max
Glyma.01G189300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52440320-52442319 Glycine max
Glyma.01G189300 2.0kb downstream 2.0kb downstream 3846 true Chr01: 52442320-52446165 Glycine max
Glyma.01G189300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52444166-52446165 Glycine max
Glyma.01G189300 5.0kb upstream 5.0kb upstream 6846 true Chr01: 52437320-52444165 Glycine max
Glyma.01G189300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52437320-52442319 Glycine max
Glyma.01G189300 5.0kb downstream 5.0kb downstream 6846 true Chr01: 52442320-52449165 Glycine max
Glyma.01G189300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52444166-52449165 Glycine max
Glyma.01G189300 10.0kb upstream 10.0kb upstream 11846 true Chr01: 52432320-52444165 Glycine max
Glyma.01G189300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52432320-52442319 Glycine max
Glyma.01G189300 10.0kb downstream 10.0kb downstream 11846 true Chr01: 52442320-52454165 Glycine max
Glyma.01G189300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52444166-52454165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302230 5265 Fabidae View MSA
124064793 5270 Rosid View MSA
123737351 5271 Pentapetalae View MSA
122791166 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.14441 0.0 0.565545 Low Low
cufflinks 0.454171 0.0 1.69128    
cufflinks 0.851549 0.0 3.05411    
cufflinks 4.45937 0.0 13.2047    
cufflinks 1.1799 0.0 4.13633    
cufflinks 8.64386 0.0 23.7846   High
cufflinks 0.40414 0.0 1.51443    
cufflinks 5.10008 0.0 14.7911   High
cufflinks 1.0547 0.0 3.72424    
cufflinks 7.652     High High
cufflinks 0.546        
cufflinks 0.485        
cufflinks 1.397        
cufflinks 1.314        
cufflinks 0.021     Low Low
cufflinks 1.161        
cufflinks 0.713        
cufflinks 0.557        
cufflinks 0.483        
cufflinks 0.845        
cufflinks 0.309        
cufflinks 0.849        
cufflinks 0.717        
cufflinks 0.353        
cufflinks 0.845        
cufflinks 0.389        

0 Strain