Gene : Glyma.01G194300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  1943
Name:  ? Glyma.01G194300 Secondary Identifier:  ? PAC:30545298
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G194300 0.5kb upstream 0.5kb upstream 4577 true Chr01: 52857275-52861851 Glycine max
Glyma.01G194300 0.5kb upstream 0.5kb upstream 500 false Chr01: 52861352-52861851 Glycine max
Glyma.01G194300 0.5kb downstream 0.5kb downstream 4577 true Chr01: 52856775-52861351 Glycine max
Glyma.01G194300 0.5kb downstream 0.5kb downstream 500 false Chr01: 52856775-52857274 Glycine max
Glyma.01G194300 1.0kb upstream 1.0kb upstream 5077 true Chr01: 52857275-52862351 Glycine max
Glyma.01G194300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52861352-52862351 Glycine max
Glyma.01G194300 1.0kb downstream 1.0kb downstream 5077 true Chr01: 52856275-52861351 Glycine max
Glyma.01G194300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52856275-52857274 Glycine max
Glyma.01G194300 2.0kb upstream 2.0kb upstream 6077 true Chr01: 52857275-52863351 Glycine max
Glyma.01G194300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52861352-52863351 Glycine max
Glyma.01G194300 2.0kb downstream 2.0kb downstream 6077 true Chr01: 52855275-52861351 Glycine max
Glyma.01G194300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52855275-52857274 Glycine max
Glyma.01G194300 5.0kb upstream 5.0kb upstream 9077 true Chr01: 52857275-52866351 Glycine max
Glyma.01G194300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52861352-52866351 Glycine max
Glyma.01G194300 5.0kb downstream 5.0kb downstream 9077 true Chr01: 52852275-52861351 Glycine max
Glyma.01G194300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52852275-52857274 Glycine max
Glyma.01G194300 10.0kb upstream 10.0kb upstream 14077 true Chr01: 52857275-52871351 Glycine max
Glyma.01G194300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52861352-52871351 Glycine max
Glyma.01G194300 10.0kb downstream 10.0kb downstream 14077 true Chr01: 52847275-52861351 Glycine max
Glyma.01G194300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52847275-52857274 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122307807 5265 Fabidae View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.32514 0.0 12.8479    
cufflinks 2.50291 0.0 10.6207   Low
cufflinks 2.90566 0.0 11.5181    
cufflinks 4.20942 0.0 17.6883   High
cufflinks 2.57902 0.0 10.8075   Low
cufflinks 3.64947 0.0 13.3992    
cufflinks 2.89214 0.0 8.85886    
cufflinks 4.14385 0.0 17.5421   High
cufflinks 3.47494 0.0 13.0221    
cufflinks 0.712        
cufflinks 0.46       Low
cufflinks 0.787        
cufflinks 0.87        
cufflinks 0.579        
cufflinks 0.78        
cufflinks 0.838        
cufflinks 0.369       Low
cufflinks 0.91        
cufflinks 0.789        
cufflinks 0.902        
cufflinks 0.434       Low
cufflinks 0.932       High
cufflinks 0.845        
cufflinks 0.568        
cufflinks 0.774        
cufflinks 0.354       Low

0 Strain