Gene : Glyma.01G192300 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1923
Name:  ? Glyma.01G192300 Secondary Identifier:  ? PAC:30542211
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G192300 0.5kb upstream 0.5kb upstream 4529 true Chr01: 52665567-52670095 Glycine max
Glyma.01G192300 0.5kb upstream 0.5kb upstream 500 false Chr01: 52665567-52666066 Glycine max
Glyma.01G192300 0.5kb downstream 0.5kb downstream 4529 true Chr01: 52666067-52670595 Glycine max
Glyma.01G192300 0.5kb downstream 0.5kb downstream 500 false Chr01: 52670096-52670595 Glycine max
Glyma.01G192300 1.0kb upstream 1.0kb upstream 5029 true Chr01: 52665067-52670095 Glycine max
Glyma.01G192300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52665067-52666066 Glycine max
Glyma.01G192300 1.0kb downstream 1.0kb downstream 5029 true Chr01: 52666067-52671095 Glycine max
Glyma.01G192300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52670096-52671095 Glycine max
Glyma.01G192300 2.0kb upstream 2.0kb upstream 6029 true Chr01: 52664067-52670095 Glycine max
Glyma.01G192300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52664067-52666066 Glycine max
Glyma.01G192300 2.0kb downstream 2.0kb downstream 6029 true Chr01: 52666067-52672095 Glycine max
Glyma.01G192300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52670096-52672095 Glycine max
Glyma.01G192300 5.0kb upstream 5.0kb upstream 9029 true Chr01: 52661067-52670095 Glycine max
Glyma.01G192300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52661067-52666066 Glycine max
Glyma.01G192300 5.0kb downstream 5.0kb downstream 9029 true Chr01: 52666067-52675095 Glycine max
Glyma.01G192300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52670096-52675095 Glycine max
Glyma.01G192300 10.0kb upstream 10.0kb upstream 14029 true Chr01: 52656067-52670095 Glycine max
Glyma.01G192300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52656067-52666066 Glycine max
Glyma.01G192300 10.0kb downstream 10.0kb downstream 14029 true Chr01: 52666067-52680095 Glycine max
Glyma.01G192300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52670096-52680095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302371 5265 Fabidae View MSA
124060971 5270 Rosid View MSA
123750839 5271 Pentapetalae View MSA
122787854 5272 Eudicot View MSA
122046367 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4592 0.0 42.8676   High
cufflinks 7.42334 0.0 24.5941    
cufflinks 3.70995 0.0 13.5984    
cufflinks 16.405 0.0 51.6359   High
cufflinks 0.405143 0.0 2.51878    
cufflinks 0.191505 0.0 1.27493 Low  
cufflinks 0.102093 0.0 0.733706 Low Low
cufflinks 6.48323 0.0 21.4581    
cufflinks 0.142902 0.0 0.974941 Low Low
cufflinks 3.65        
cufflinks 0.002     Low Low
cufflinks 1.587        
cufflinks 0.055     Low  
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.273        
cufflinks 0.002     Low Low
cufflinks 1.243        
cufflinks 1.428        
cufflinks 3.975        
cufflinks 0.002     Low Low
cufflinks 4.617        
cufflinks 3.147        
cufflinks 0.005     Low Low
cufflinks 5.059        
cufflinks 0.002     Low Low

0 Strain