Gene : Glyma.01G193400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10177:SF255 - CYCLIN-D5-1 Genomic Order:  1934
Name:  ? Glyma.01G193400 Secondary Identifier:  ? PAC:30544638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G193400 0.5kb upstream 0.5kb upstream 3074 true Chr01: 52796777-52799850 Glycine max
Glyma.01G193400 0.5kb upstream 0.5kb upstream 500 false Chr01: 52796777-52797276 Glycine max
Glyma.01G193400 0.5kb downstream 0.5kb downstream 3074 true Chr01: 52797277-52800350 Glycine max
Glyma.01G193400 0.5kb downstream 0.5kb downstream 500 false Chr01: 52799851-52800350 Glycine max
Glyma.01G193400 1.0kb upstream 1.0kb upstream 3574 true Chr01: 52796277-52799850 Glycine max
Glyma.01G193400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52796277-52797276 Glycine max
Glyma.01G193400 1.0kb downstream 1.0kb downstream 3574 true Chr01: 52797277-52800850 Glycine max
Glyma.01G193400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52799851-52800850 Glycine max
Glyma.01G193400 2.0kb upstream 2.0kb upstream 4574 true Chr01: 52795277-52799850 Glycine max
Glyma.01G193400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52795277-52797276 Glycine max
Glyma.01G193400 2.0kb downstream 2.0kb downstream 4574 true Chr01: 52797277-52801850 Glycine max
Glyma.01G193400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52799851-52801850 Glycine max
Glyma.01G193400 5.0kb upstream 5.0kb upstream 7574 true Chr01: 52792277-52799850 Glycine max
Glyma.01G193400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52792277-52797276 Glycine max
Glyma.01G193400 5.0kb downstream 5.0kb downstream 7574 true Chr01: 52797277-52804850 Glycine max
Glyma.01G193400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52799851-52804850 Glycine max
Glyma.01G193400 10.0kb upstream 10.0kb upstream 12574 true Chr01: 52787277-52799850 Glycine max
Glyma.01G193400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52787277-52797276 Glycine max
Glyma.01G193400 10.0kb downstream 10.0kb downstream 12574 true Chr01: 52797277-52809850 Glycine max
Glyma.01G193400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52799851-52809850 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305750 5265 Fabidae View MSA
124070747 5270 Rosid View MSA
123751298 5271 Pentapetalae View MSA
122797790 5272 Eudicot View MSA
122049742 5273 Angiosperm View MSA
121311569 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.187922 0.0 0.722788 Low  
cufflinks 0.0942282 0.0 0.372108 Low  
cufflinks 0.06651 0.0 0.265715 Low  
cufflinks 0.0756556 0.0 0.301028 Low  
cufflinks 0.690324 0.0 2.48944   High
cufflinks 0.383158 0.0 1.42599    
cufflinks 0.019885 0.0 0.0856429 Low Low
cufflinks 0.299782 0.0 1.12841    
cufflinks 0.497705 0.0 1.82737    
cufflinks 0.238        
cufflinks 0.015     Low Low
cufflinks 0.379        
cufflinks 1.64       High
cufflinks 1.52       High
cufflinks 0.021     Low Low
cufflinks 0.739        
cufflinks 0.11        
cufflinks 0.257        
cufflinks 0.054     Low  
cufflinks 0.726        
cufflinks 0.084        
cufflinks 0.694        
cufflinks 0.822        
cufflinks 0.044     Low Low
cufflinks 0.798        
cufflinks 0.11        

0 Strain