Gene : Glyma.01G209200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13402 - RGPR-RELATED Genomic Order:  2092
Name:  ? Glyma.01G209200 Secondary Identifier:  ? PAC:30541733
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G209200 0.5kb upstream 0.5kb upstream 7884 true Chr01: 54079833-54087716 Glycine max
Glyma.01G209200 0.5kb upstream 0.5kb upstream 500 false Chr01: 54079833-54080332 Glycine max
Glyma.01G209200 0.5kb downstream 0.5kb downstream 7884 true Chr01: 54080333-54088216 Glycine max
Glyma.01G209200 0.5kb downstream 0.5kb downstream 500 false Chr01: 54087717-54088216 Glycine max
Glyma.01G209200 1.0kb upstream 1.0kb upstream 8384 true Chr01: 54079333-54087716 Glycine max
Glyma.01G209200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54079333-54080332 Glycine max
Glyma.01G209200 1.0kb downstream 1.0kb downstream 8384 true Chr01: 54080333-54088716 Glycine max
Glyma.01G209200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54087717-54088716 Glycine max
Glyma.01G209200 2.0kb upstream 2.0kb upstream 9384 true Chr01: 54078333-54087716 Glycine max
Glyma.01G209200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54078333-54080332 Glycine max
Glyma.01G209200 2.0kb downstream 2.0kb downstream 9384 true Chr01: 54080333-54089716 Glycine max
Glyma.01G209200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54087717-54089716 Glycine max
Glyma.01G209200 5.0kb upstream 5.0kb upstream 12384 true Chr01: 54075333-54087716 Glycine max
Glyma.01G209200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54075333-54080332 Glycine max
Glyma.01G209200 5.0kb downstream 5.0kb downstream 12384 true Chr01: 54080333-54092716 Glycine max
Glyma.01G209200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54087717-54092716 Glycine max
Glyma.01G209200 10.0kb upstream 10.0kb upstream 17384 true Chr01: 54070333-54087716 Glycine max
Glyma.01G209200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54070333-54080332 Glycine max
Glyma.01G209200 10.0kb downstream 10.0kb downstream 17384 true Chr01: 54080333-54097716 Glycine max
Glyma.01G209200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54087717-54097716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301249 5265 Fabidae View MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.85294 0.0 26.7479    
cufflinks 7.08706 0.0 18.9635   Low
cufflinks 11.6366 0.0 32.0462   High
cufflinks 10.8554 0.0 29.6857    
cufflinks 10.1346 0.0 27.5559    
cufflinks 9.59959 0.0 26.0285    
cufflinks 9.14041 0.0 24.6943    
cufflinks 11.1061 0.0 30.4118    
cufflinks 8.18305 0.0 22.0036   Low
cufflinks 16.526     High  
cufflinks 14.513     High  
cufflinks 12.018     High  
cufflinks 12.26     High  
cufflinks 11.671     High  
cufflinks 14.027     High  
cufflinks 11.107     High  
cufflinks 17.846     High High
cufflinks 14.611     High  
cufflinks 12.396     High  
cufflinks 9.637     High Low
cufflinks 15.117     High  
cufflinks 11.281     High  
cufflinks 11.697     High  
cufflinks 14.621     High  
cufflinks 9.716     High Low
cufflinks 22.366     High High

0 Strain