Gene : Glyma.01G214600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  2146
Name:  ? Glyma.01G214600 Secondary Identifier:  ? PAC:30545322
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G214600 0.5kb upstream 0.5kb upstream 2751 true Chr01: 54554210-54556960 Glycine max
Glyma.01G214600 0.5kb upstream 0.5kb upstream 500 false Chr01: 54556461-54556960 Glycine max
Glyma.01G214600 0.5kb downstream 0.5kb downstream 2751 true Chr01: 54553710-54556460 Glycine max
Glyma.01G214600 0.5kb downstream 0.5kb downstream 500 false Chr01: 54553710-54554209 Glycine max
Glyma.01G214600 1.0kb upstream 1.0kb upstream 3251 true Chr01: 54554210-54557460 Glycine max
Glyma.01G214600 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54556461-54557460 Glycine max
Glyma.01G214600 1.0kb downstream 1.0kb downstream 3251 true Chr01: 54553210-54556460 Glycine max
Glyma.01G214600 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54553210-54554209 Glycine max
Glyma.01G214600 2.0kb upstream 2.0kb upstream 4251 true Chr01: 54554210-54558460 Glycine max
Glyma.01G214600 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54556461-54558460 Glycine max
Glyma.01G214600 2.0kb downstream 2.0kb downstream 4251 true Chr01: 54552210-54556460 Glycine max
Glyma.01G214600 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54552210-54554209 Glycine max
Glyma.01G214600 5.0kb upstream 5.0kb upstream 7251 true Chr01: 54554210-54561460 Glycine max
Glyma.01G214600 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54556461-54561460 Glycine max
Glyma.01G214600 5.0kb downstream 5.0kb downstream 7251 true Chr01: 54549210-54556460 Glycine max
Glyma.01G214600 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54549210-54554209 Glycine max
Glyma.01G214600 10.0kb upstream 10.0kb upstream 12251 true Chr01: 54554210-54566460 Glycine max
Glyma.01G214600 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54556461-54566460 Glycine max
Glyma.01G214600 10.0kb downstream 10.0kb downstream 12251 true Chr01: 54544210-54556460 Glycine max
Glyma.01G214600 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54544210-54554209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299018 5265 Fabidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.4324 0.0 81.3356 High  
cufflinks 4.14494 0.0 12.9157    
cufflinks 156.577 0.0 500.584 High High
cufflinks 3.7917 0.0 11.9231    
cufflinks 3.87126 0.0 12.1556    
cufflinks 22.6724 0.0 60.5225    
cufflinks 4.1946 0.0 12.9961    
cufflinks 8.25327 0.0 23.3975    
cufflinks 4.1638 0.0 12.9447    
cufflinks 3.764        
cufflinks 1.857        
cufflinks 67.336     High High
cufflinks 3.337        
cufflinks 0.999       Low
cufflinks 2.125        
cufflinks 4.226        
cufflinks 5.587        
cufflinks 17.027     High High
cufflinks 3.298        
cufflinks 4.873        
cufflinks 1.056       Low
cufflinks 5.25        
cufflinks 7.348        
cufflinks 2.398        
cufflinks 4.467        
cufflinks 1.524        

0 Strain