Gene : Glyma.01G213700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0256 - 1-aminocyclopropane-1-carboxylate synthase, and related proteins Genomic Order:  2137
Name:  ? Glyma.01G213700 Secondary Identifier:  ? PAC:30544916
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G213700 0.5kb upstream 0.5kb upstream 3464 true Chr01: 54486994-54490457 Glycine max
Glyma.01G213700 0.5kb upstream 0.5kb upstream 500 false Chr01: 54489958-54490457 Glycine max
Glyma.01G213700 0.5kb downstream 0.5kb downstream 3464 true Chr01: 54486494-54489957 Glycine max
Glyma.01G213700 0.5kb downstream 0.5kb downstream 500 false Chr01: 54486494-54486993 Glycine max
Glyma.01G213700 1.0kb upstream 1.0kb upstream 3964 true Chr01: 54486994-54490957 Glycine max
Glyma.01G213700 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54489958-54490957 Glycine max
Glyma.01G213700 1.0kb downstream 1.0kb downstream 3964 true Chr01: 54485994-54489957 Glycine max
Glyma.01G213700 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54485994-54486993 Glycine max
Glyma.01G213700 2.0kb upstream 2.0kb upstream 4964 true Chr01: 54486994-54491957 Glycine max
Glyma.01G213700 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54489958-54491957 Glycine max
Glyma.01G213700 2.0kb downstream 2.0kb downstream 4964 true Chr01: 54484994-54489957 Glycine max
Glyma.01G213700 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54484994-54486993 Glycine max
Glyma.01G213700 5.0kb upstream 5.0kb upstream 7964 true Chr01: 54486994-54494957 Glycine max
Glyma.01G213700 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54489958-54494957 Glycine max
Glyma.01G213700 5.0kb downstream 5.0kb downstream 7964 true Chr01: 54481994-54489957 Glycine max
Glyma.01G213700 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54481994-54486993 Glycine max
Glyma.01G213700 10.0kb upstream 10.0kb upstream 12964 true Chr01: 54486994-54499957 Glycine max
Glyma.01G213700 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54489958-54499957 Glycine max
Glyma.01G213700 10.0kb downstream 10.0kb downstream 12964 true Chr01: 54476994-54489957 Glycine max
Glyma.01G213700 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54476994-54486993 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314101 5265 Fabidae View MSA
124060973 5270 Rosid View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.86357 0.0 23.8574   High
cufflinks 1.92656 0.0 6.10643    
cufflinks 2.72178 0.0 8.178    
cufflinks 2.14924 0.0 6.70207    
cufflinks 0.703368 0.0 2.49854    
cufflinks 0.608315 0.0 2.18198   Low
cufflinks 2.63982 0.0 8.00694    
cufflinks 3.73355 0.0 10.7888    
cufflinks 0.412073 0.0 1.51297   Low
cufflinks 0.629        
cufflinks 0.026     Low Low
cufflinks 2.145        
cufflinks 0.088     Low  
cufflinks 0.105        
cufflinks 0.085        
cufflinks 3.549        
cufflinks 0.026     Low Low
cufflinks 1.752        
cufflinks 2.009        
cufflinks 5.152       High
cufflinks 0.025     Low Low
cufflinks 6.125       High
cufflinks 3.028        
cufflinks 0.007     Low Low
cufflinks 6.216       High
cufflinks 0.019     Low Low

0 Strain