Gene : Glyma.01G212000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22602:SF0 - TRANSFERASE CAF17, MITOCHONDRIAL-RELATED Genomic Order:  2120
Name:  ? Glyma.01G212000 Secondary Identifier:  ? PAC:30543836
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G212000 0.5kb upstream 0.5kb upstream 3617 true Chr01: 54354496-54358112 Glycine max
Glyma.01G212000 0.5kb upstream 0.5kb upstream 500 false Chr01: 54357613-54358112 Glycine max
Glyma.01G212000 0.5kb downstream 0.5kb downstream 3617 true Chr01: 54353996-54357612 Glycine max
Glyma.01G212000 0.5kb downstream 0.5kb downstream 500 false Chr01: 54353996-54354495 Glycine max
Glyma.01G212000 1.0kb upstream 1.0kb upstream 4117 true Chr01: 54354496-54358612 Glycine max
Glyma.01G212000 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54357613-54358612 Glycine max
Glyma.01G212000 1.0kb downstream 1.0kb downstream 4117 true Chr01: 54353496-54357612 Glycine max
Glyma.01G212000 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54353496-54354495 Glycine max
Glyma.01G212000 2.0kb upstream 2.0kb upstream 5117 true Chr01: 54354496-54359612 Glycine max
Glyma.01G212000 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54357613-54359612 Glycine max
Glyma.01G212000 2.0kb downstream 2.0kb downstream 5117 true Chr01: 54352496-54357612 Glycine max
Glyma.01G212000 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54352496-54354495 Glycine max
Glyma.01G212000 5.0kb upstream 5.0kb upstream 8117 true Chr01: 54354496-54362612 Glycine max
Glyma.01G212000 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54357613-54362612 Glycine max
Glyma.01G212000 5.0kb downstream 5.0kb downstream 8117 true Chr01: 54349496-54357612 Glycine max
Glyma.01G212000 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54349496-54354495 Glycine max
Glyma.01G212000 10.0kb upstream 10.0kb upstream 13117 true Chr01: 54354496-54367612 Glycine max
Glyma.01G212000 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54357613-54367612 Glycine max
Glyma.01G212000 10.0kb downstream 10.0kb downstream 13117 true Chr01: 54344496-54357612 Glycine max
Glyma.01G212000 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54344496-54354495 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122248061 5265 Fabidae Singleton cluster - no MSA
124052624 5270 Rosid View MSA
123745286 5271 Pentapetalae View MSA
122786826 5272 Eudicot View MSA
122047678 5273 Angiosperm View MSA
121345221 5274 Embryophyte View MSA
123428171 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3413 0.0 12.3493    
cufflinks 1.31001 0.0 5.26796    
cufflinks 0.725816 0.0 4.2961    
cufflinks 1.10565 0.0 7.61422    
cufflinks 0.891665 0.0 5.03023    
cufflinks 0.87622 0.0 4.96314    
cufflinks 5.50424 0.0 21.8334   High
cufflinks 0.761127 0.0 4.42953    
cufflinks 0.866253 0.0 3.77459    
cufflinks 0.467        
cufflinks 0.601        
cufflinks 0.311        
cufflinks 0.251       Low
cufflinks 0.162       Low
cufflinks 0.499        
cufflinks 0.319        
cufflinks 0.81       High
cufflinks 0.283        
cufflinks 0.397        
cufflinks 0.36        
cufflinks 0.76       High
cufflinks 0.371        
cufflinks 0.393        
cufflinks 0.443        
cufflinks 0.37        
cufflinks 0.684       High

0 Strain