Gene : Glyma.01G211200 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00515//PF13181//PF13414 - Tetratricopeptide repeat (TPR_1) // Tetratricopeptide repeat (TPR_8) // TPR repeat (TPR_11) Genomic Order:  2112
Name:  ? Glyma.01G211200 Secondary Identifier:  ? PAC:30543208
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G211200 0.5kb upstream 0.5kb upstream 4577 true Chr01: 54273562-54278138 Glycine max
Glyma.01G211200 0.5kb upstream 0.5kb upstream 500 false Chr01: 54273562-54274061 Glycine max
Glyma.01G211200 0.5kb downstream 0.5kb downstream 4577 true Chr01: 54274062-54278638 Glycine max
Glyma.01G211200 0.5kb downstream 0.5kb downstream 500 false Chr01: 54278139-54278638 Glycine max
Glyma.01G211200 1.0kb upstream 1.0kb upstream 5077 true Chr01: 54273062-54278138 Glycine max
Glyma.01G211200 1.0kb upstream 1.0kb upstream 1000 false Chr01: 54273062-54274061 Glycine max
Glyma.01G211200 1.0kb downstream 1.0kb downstream 5077 true Chr01: 54274062-54279138 Glycine max
Glyma.01G211200 1.0kb downstream 1.0kb downstream 1000 false Chr01: 54278139-54279138 Glycine max
Glyma.01G211200 2.0kb upstream 2.0kb upstream 6077 true Chr01: 54272062-54278138 Glycine max
Glyma.01G211200 2.0kb upstream 2.0kb upstream 2000 false Chr01: 54272062-54274061 Glycine max
Glyma.01G211200 2.0kb downstream 2.0kb downstream 6077 true Chr01: 54274062-54280138 Glycine max
Glyma.01G211200 2.0kb downstream 2.0kb downstream 2000 false Chr01: 54278139-54280138 Glycine max
Glyma.01G211200 5.0kb upstream 5.0kb upstream 9077 true Chr01: 54269062-54278138 Glycine max
Glyma.01G211200 5.0kb upstream 5.0kb upstream 5000 false Chr01: 54269062-54274061 Glycine max
Glyma.01G211200 5.0kb downstream 5.0kb downstream 9077 true Chr01: 54274062-54283138 Glycine max
Glyma.01G211200 5.0kb downstream 5.0kb downstream 5000 false Chr01: 54278139-54283138 Glycine max
Glyma.01G211200 10.0kb upstream 10.0kb upstream 14077 true Chr01: 54264062-54278138 Glycine max
Glyma.01G211200 10.0kb upstream 10.0kb upstream 10000 false Chr01: 54264062-54274061 Glycine max
Glyma.01G211200 10.0kb downstream 10.0kb downstream 14077 true Chr01: 54274062-54288138 Glycine max
Glyma.01G211200 10.0kb downstream 10.0kb downstream 10000 false Chr01: 54278139-54288138 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308522 5265 Fabidae View MSA
124050195 5270 Rosid View MSA
123742862 5271 Pentapetalae View MSA
122790391 5272 Eudicot View MSA
122044378 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121343980 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.1962 0.0 114.84 High  
cufflinks 24.6876 0.0 90.6031 High  
cufflinks 25.7612 0.0 106.203 High  
cufflinks 52.5098 0.0 241.856 High High
cufflinks 53.2888 0.0 247.978 High High
cufflinks 22.9281 0.0 82.9784 High Low
cufflinks 39.5533 0.0 187.734 High  
cufflinks 33.2182 0.0 148.897 High  
cufflinks 43.4516 0.0 186.848 High  
cufflinks 4.851        
cufflinks 31.907     High High
cufflinks 7.285     High  
cufflinks 9.182     High  
cufflinks 11.106     High  
cufflinks 28.258     High High
cufflinks 2.674       Low
cufflinks 5.127        
cufflinks 6.22        
cufflinks 6.141        
cufflinks 3.034       Low
cufflinks 15.735     High High
cufflinks 2.918       Low
cufflinks 3.227        
cufflinks 9.573     High  
cufflinks 2.671       Low
cufflinks 9.747     High  

0 Strain