Gene : Glyma.19G004700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR16212:SF4 - FOCADHESIN Genomic Order:  47
Name:  ? Glyma.19G004700 Secondary Identifier:  ? PAC:30511472
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G004700 0.5kb upstream 0.5kb upstream 13449 true Chr19: 379721-393169 Glycine max
Glyma.19G004700 0.5kb upstream 0.5kb upstream 500 false Chr19: 392670-393169 Glycine max
Glyma.19G004700 0.5kb downstream 0.5kb downstream 13449 true Chr19: 379221-392669 Glycine max
Glyma.19G004700 0.5kb downstream 0.5kb downstream 500 false Chr19: 379221-379720 Glycine max
Glyma.19G004700 1.0kb upstream 1.0kb upstream 13949 true Chr19: 379721-393669 Glycine max
Glyma.19G004700 1.0kb upstream 1.0kb upstream 1000 false Chr19: 392670-393669 Glycine max
Glyma.19G004700 1.0kb downstream 1.0kb downstream 13949 true Chr19: 378721-392669 Glycine max
Glyma.19G004700 1.0kb downstream 1.0kb downstream 1000 false Chr19: 378721-379720 Glycine max
Glyma.19G004700 2.0kb upstream 2.0kb upstream 14949 true Chr19: 379721-394669 Glycine max
Glyma.19G004700 2.0kb upstream 2.0kb upstream 2000 false Chr19: 392670-394669 Glycine max
Glyma.19G004700 2.0kb downstream 2.0kb downstream 14949 true Chr19: 377721-392669 Glycine max
Glyma.19G004700 2.0kb downstream 2.0kb downstream 2000 false Chr19: 377721-379720 Glycine max
Glyma.19G004700 5.0kb upstream 5.0kb upstream 17949 true Chr19: 379721-397669 Glycine max
Glyma.19G004700 5.0kb upstream 5.0kb upstream 5000 false Chr19: 392670-397669 Glycine max
Glyma.19G004700 5.0kb downstream 5.0kb downstream 17949 true Chr19: 374721-392669 Glycine max
Glyma.19G004700 5.0kb downstream 5.0kb downstream 5000 false Chr19: 374721-379720 Glycine max
Glyma.19G004700 10.0kb upstream 10.0kb upstream 22949 true Chr19: 379721-402669 Glycine max
Glyma.19G004700 10.0kb upstream 10.0kb upstream 10000 false Chr19: 392670-402669 Glycine max
Glyma.19G004700 10.0kb downstream 10.0kb downstream 22949 true Chr19: 369721-392669 Glycine max
Glyma.19G004700 10.0kb downstream 10.0kb downstream 10000 false Chr19: 369721-379720 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306112 5265 Fabidae View MSA
124073528 5270 Rosid View MSA
123737254 5271 Pentapetalae View MSA
122792826 5272 Eudicot View MSA
122044820 5273 Angiosperm View MSA
121344294 5274 Embryophyte View MSA
123424915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.64676 0.0 16.7285    
cufflinks 5.13139 0.0 15.2243    
cufflinks 5.07352 0.0 15.0415    
cufflinks 5.2632 0.0 15.6445    
cufflinks 6.00447 0.0 17.7723    
cufflinks 2.659 0.0 12.2033   Low
cufflinks 4.19884 0.0 14.7863    
cufflinks 5.05298 0.0 17.3155    
cufflinks 4.45405 0.0 13.3386    
cufflinks 0.744        
cufflinks 0.151       Low
cufflinks 0.921        
cufflinks 1.303        
cufflinks 1.518       High
cufflinks 0.313       Low
cufflinks 0.978        
cufflinks 0.505        
cufflinks 1.18        
cufflinks 1.511       High
cufflinks 1.024        
cufflinks 0.271       Low
cufflinks 1.258        
cufflinks 1.146        
cufflinks 0.262       Low
cufflinks 1.009        
cufflinks 0.445        

0 Strain