Gene : Glyma.19G004900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31301:SF12 - LOB DOMAIN-CONTAINING PROTEIN 25 Genomic Order:  49
Name:  ? Glyma.19G004900 Secondary Identifier:  ? PAC:30514022
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G004900 0.5kb upstream 0.5kb upstream 2504 true Chr19: 442917-445420 Glycine max
Glyma.19G004900 0.5kb upstream 0.5kb upstream 500 false Chr19: 444921-445420 Glycine max
Glyma.19G004900 0.5kb downstream 0.5kb downstream 2504 true Chr19: 442417-444920 Glycine max
Glyma.19G004900 0.5kb downstream 0.5kb downstream 500 false Chr19: 442417-442916 Glycine max
Glyma.19G004900 1.0kb upstream 1.0kb upstream 3004 true Chr19: 442917-445920 Glycine max
Glyma.19G004900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 444921-445920 Glycine max
Glyma.19G004900 1.0kb downstream 1.0kb downstream 3004 true Chr19: 441917-444920 Glycine max
Glyma.19G004900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 441917-442916 Glycine max
Glyma.19G004900 2.0kb upstream 2.0kb upstream 4004 true Chr19: 442917-446920 Glycine max
Glyma.19G004900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 444921-446920 Glycine max
Glyma.19G004900 2.0kb downstream 2.0kb downstream 4004 true Chr19: 440917-444920 Glycine max
Glyma.19G004900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 440917-442916 Glycine max
Glyma.19G004900 5.0kb upstream 5.0kb upstream 7004 true Chr19: 442917-449920 Glycine max
Glyma.19G004900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 444921-449920 Glycine max
Glyma.19G004900 5.0kb downstream 5.0kb downstream 7004 true Chr19: 437917-444920 Glycine max
Glyma.19G004900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 437917-442916 Glycine max
Glyma.19G004900 10.0kb upstream 10.0kb upstream 12004 true Chr19: 442917-454920 Glycine max
Glyma.19G004900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 444921-454920 Glycine max
Glyma.19G004900 10.0kb downstream 10.0kb downstream 12004 true Chr19: 432917-444920 Glycine max
Glyma.19G004900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 432917-442916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255509 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0830354 0.0 0.352502 Low  
cufflinks 0.106884 0.0 0.441144 Low  
cufflinks 0.519504 0.0 3.68112    
cufflinks 0.252667 0.0 0.996886    
cufflinks 1.00141 0.0 6.2796    
cufflinks 0.155885 0.0 0.62689 Low  
cufflinks 0.0701932 0.0 0.300275 Low Low
cufflinks 5.96333 0.0 25.3397   High
cufflinks 2.00066 0.0 11.4605   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.793        
cufflinks 0.024     Low  
cufflinks 0.087     Low  
cufflinks 0.005     Low Low
cufflinks 0.373        
cufflinks 0.113        
cufflinks 0.682        
cufflinks 0.056     Low  
cufflinks 0.004     Low Low
cufflinks 0.028     Low  
cufflinks 0.782        
cufflinks 0.066     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.293       High
cufflinks 0.091     Low  
cufflinks 2.063       High

0 Strain