Gene : Glyma.19G005200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22852 - LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEIN Genomic Order:  52
Name:  ? Glyma.19G005200 Secondary Identifier:  ? PAC:30513788
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G005200 0.5kb upstream 0.5kb upstream 4452 true Chr19: 472201-476652 Glycine max
Glyma.19G005200 0.5kb upstream 0.5kb upstream 500 false Chr19: 476153-476652 Glycine max
Glyma.19G005200 0.5kb downstream 0.5kb downstream 4452 true Chr19: 471701-476152 Glycine max
Glyma.19G005200 0.5kb downstream 0.5kb downstream 500 false Chr19: 471701-472200 Glycine max
Glyma.19G005200 1.0kb upstream 1.0kb upstream 4952 true Chr19: 472201-477152 Glycine max
Glyma.19G005200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 476153-477152 Glycine max
Glyma.19G005200 1.0kb downstream 1.0kb downstream 4952 true Chr19: 471201-476152 Glycine max
Glyma.19G005200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 471201-472200 Glycine max
Glyma.19G005200 2.0kb upstream 2.0kb upstream 5952 true Chr19: 472201-478152 Glycine max
Glyma.19G005200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 476153-478152 Glycine max
Glyma.19G005200 2.0kb downstream 2.0kb downstream 5952 true Chr19: 470201-476152 Glycine max
Glyma.19G005200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 470201-472200 Glycine max
Glyma.19G005200 5.0kb upstream 5.0kb upstream 8952 true Chr19: 472201-481152 Glycine max
Glyma.19G005200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 476153-481152 Glycine max
Glyma.19G005200 5.0kb downstream 5.0kb downstream 8952 true Chr19: 467201-476152 Glycine max
Glyma.19G005200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 467201-472200 Glycine max
Glyma.19G005200 10.0kb upstream 10.0kb upstream 13952 true Chr19: 472201-486152 Glycine max
Glyma.19G005200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 476153-486152 Glycine max
Glyma.19G005200 10.0kb downstream 10.0kb downstream 13952 true Chr19: 462201-476152 Glycine max
Glyma.19G005200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 462201-472200 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041110 5273 Angiosperm View MSA
122308228 5265 Fabidae View MSA
124066705 5270 Rosid View MSA
123738677 5271 Pentapetalae View MSA
122787959 5272 Eudicot View MSA
121344109 5274 Embryophyte View MSA
123428561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176395 0.0 0.854919 Low Low
cufflinks 3.64777 0.0 13.3823   High
cufflinks 0.585589 0.0 2.63783    
cufflinks 1.21113 0.0 6.32775    
cufflinks 3.98972 0.0 14.3366   High
cufflinks 1.77702 0.0 6.45764    
cufflinks 0.808163 0.0 5.82863    
cufflinks 1.28712 0.0 6.64723    
cufflinks 2.45229 0.0 13.2704    
cufflinks 0.298        
cufflinks 0.07       Low
cufflinks 0.348        
cufflinks 0.935       High
cufflinks 1.318       High
cufflinks 0.085        
cufflinks 0.228        
cufflinks 0.124        
cufflinks 0.226        
cufflinks 1.181       High
cufflinks 0.14        
cufflinks 0.09        
cufflinks 0.189        
cufflinks 0.648       High
cufflinks 0.036     Low Low
cufflinks 0.161        
cufflinks 0.165        

0 Strain