Gene : Glyma.02G071200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22763:SF39 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  712
Name:  ? Glyma.02G071200 Secondary Identifier:  ? PAC:30509240
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G071200 0.5kb upstream 0.5kb upstream 2203 true Chr02: 6253690-6255892 Glycine max
Glyma.02G071200 0.5kb upstream 0.5kb upstream 500 false Chr02: 6255393-6255892 Glycine max
Glyma.02G071200 0.5kb downstream 0.5kb downstream 2203 true Chr02: 6253190-6255392 Glycine max
Glyma.02G071200 0.5kb downstream 0.5kb downstream 500 false Chr02: 6253190-6253689 Glycine max
Glyma.02G071200 1.0kb upstream 1.0kb upstream 2703 true Chr02: 6253690-6256392 Glycine max
Glyma.02G071200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6255393-6256392 Glycine max
Glyma.02G071200 1.0kb downstream 1.0kb downstream 2703 true Chr02: 6252690-6255392 Glycine max
Glyma.02G071200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6252690-6253689 Glycine max
Glyma.02G071200 2.0kb upstream 2.0kb upstream 3703 true Chr02: 6253690-6257392 Glycine max
Glyma.02G071200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6255393-6257392 Glycine max
Glyma.02G071200 2.0kb downstream 2.0kb downstream 3703 true Chr02: 6251690-6255392 Glycine max
Glyma.02G071200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6251690-6253689 Glycine max
Glyma.02G071200 5.0kb upstream 5.0kb upstream 6703 true Chr02: 6253690-6260392 Glycine max
Glyma.02G071200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6255393-6260392 Glycine max
Glyma.02G071200 5.0kb downstream 5.0kb downstream 6703 true Chr02: 6248690-6255392 Glycine max
Glyma.02G071200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6248690-6253689 Glycine max
Glyma.02G071200 10.0kb upstream 10.0kb upstream 11703 true Chr02: 6253690-6265392 Glycine max
Glyma.02G071200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6255393-6265392 Glycine max
Glyma.02G071200 10.0kb downstream 10.0kb downstream 11703 true Chr02: 6243690-6255392 Glycine max
Glyma.02G071200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6243690-6253689 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309509 5265 Fabidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 22.4655 0.0 60.0413 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.103214 0.0 0.408993 Low  
cufflinks 0.0131141 0.0 0.059315 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.142       High
cufflinks 0.055     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain