Gene : Glyma.19G005800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11252:SF3 - POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  58
Name:  ? Glyma.19G005800 Secondary Identifier:  ? PAC:30513614
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G005800 0.5kb upstream 0.5kb upstream 9296 true Chr19: 522587-531882 Glycine max
Glyma.19G005800 0.5kb upstream 0.5kb upstream 500 false Chr19: 531383-531882 Glycine max
Glyma.19G005800 0.5kb downstream 0.5kb downstream 9296 true Chr19: 522087-531382 Glycine max
Glyma.19G005800 0.5kb downstream 0.5kb downstream 500 false Chr19: 522087-522586 Glycine max
Glyma.19G005800 1.0kb upstream 1.0kb upstream 9796 true Chr19: 522587-532382 Glycine max
Glyma.19G005800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 531383-532382 Glycine max
Glyma.19G005800 1.0kb downstream 1.0kb downstream 9796 true Chr19: 521587-531382 Glycine max
Glyma.19G005800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 521587-522586 Glycine max
Glyma.19G005800 2.0kb upstream 2.0kb upstream 10796 true Chr19: 522587-533382 Glycine max
Glyma.19G005800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 531383-533382 Glycine max
Glyma.19G005800 2.0kb downstream 2.0kb downstream 10796 true Chr19: 520587-531382 Glycine max
Glyma.19G005800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 520587-522586 Glycine max
Glyma.19G005800 5.0kb upstream 5.0kb upstream 13796 true Chr19: 522587-536382 Glycine max
Glyma.19G005800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 531383-536382 Glycine max
Glyma.19G005800 5.0kb downstream 5.0kb downstream 13796 true Chr19: 517587-531382 Glycine max
Glyma.19G005800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 517587-522586 Glycine max
Glyma.19G005800 10.0kb upstream 10.0kb upstream 18796 true Chr19: 522587-541382 Glycine max
Glyma.19G005800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 531383-541382 Glycine max
Glyma.19G005800 10.0kb downstream 10.0kb downstream 18796 true Chr19: 512587-531382 Glycine max
Glyma.19G005800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 512587-522586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305342 5265 Fabidae View MSA
124060543 5270 Rosid View MSA
123737032 5271 Pentapetalae View MSA
122787659 5272 Eudicot View MSA
122046246 5273 Angiosperm View MSA
121345190 5274 Embryophyte View MSA
123425346 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08621 0.0 13.7261    
cufflinks 3.35733 0.0 9.31665    
cufflinks 0.858921 0.0 2.83907   Low
cufflinks 1.72267 0.0 5.17126    
cufflinks 7.02391 0.0 18.7615   High
cufflinks 3.46758 0.0 9.59544    
cufflinks 2.34233 0.0 6.77006    
cufflinks 2.66234 0.0 7.5631    
cufflinks 2.92981 0.0 8.2349    
cufflinks 1.234        
cufflinks 0.248       Low
cufflinks 0.998        
cufflinks 4.02       High
cufflinks 5.876       High
cufflinks 0.357        
cufflinks 0.985        
cufflinks 0.535        
cufflinks 0.794        
cufflinks 2.394       High
cufflinks 0.313        
cufflinks 0.368        
cufflinks 0.496        
cufflinks 1.149        
cufflinks 0.147       Low
cufflinks 0.728        
cufflinks 0.729        

0 Strain