Gene : Glyma.02G080900 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  809
Name:  ? Glyma.02G080900 Secondary Identifier:  ? PAC:30506922
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G080900 0.5kb upstream 0.5kb upstream 8710 true Chr02: 6970629-6979338 Glycine max
Glyma.02G080900 0.5kb upstream 0.5kb upstream 500 false Chr02: 6978839-6979338 Glycine max
Glyma.02G080900 0.5kb downstream 0.5kb downstream 8710 true Chr02: 6970129-6978838 Glycine max
Glyma.02G080900 0.5kb downstream 0.5kb downstream 500 false Chr02: 6970129-6970628 Glycine max
Glyma.02G080900 1.0kb upstream 1.0kb upstream 9210 true Chr02: 6970629-6979838 Glycine max
Glyma.02G080900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6978839-6979838 Glycine max
Glyma.02G080900 1.0kb downstream 1.0kb downstream 9210 true Chr02: 6969629-6978838 Glycine max
Glyma.02G080900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6969629-6970628 Glycine max
Glyma.02G080900 2.0kb upstream 2.0kb upstream 10210 true Chr02: 6970629-6980838 Glycine max
Glyma.02G080900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6978839-6980838 Glycine max
Glyma.02G080900 2.0kb downstream 2.0kb downstream 10210 true Chr02: 6968629-6978838 Glycine max
Glyma.02G080900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6968629-6970628 Glycine max
Glyma.02G080900 5.0kb upstream 5.0kb upstream 13210 true Chr02: 6970629-6983838 Glycine max
Glyma.02G080900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6978839-6983838 Glycine max
Glyma.02G080900 5.0kb downstream 5.0kb downstream 13210 true Chr02: 6965629-6978838 Glycine max
Glyma.02G080900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6965629-6970628 Glycine max
Glyma.02G080900 10.0kb upstream 10.0kb upstream 18210 true Chr02: 6970629-6988838 Glycine max
Glyma.02G080900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6978839-6988838 Glycine max
Glyma.02G080900 10.0kb downstream 10.0kb downstream 18210 true Chr02: 6960629-6978838 Glycine max
Glyma.02G080900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6960629-6970628 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253683 5265 Fabidae View MSA
124042718 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1153 0.0 69.4147 High  
cufflinks 20.0237 0.0 56.4336    
cufflinks 4.58077 0.0 12.3405   Low
cufflinks 52.0057 0.0 170.587 High  
cufflinks 36.0441 0.0 109.758 High  
cufflinks 139.427 0.0 597.296 High High
cufflinks 21.044 0.0 59.4846    
cufflinks 83.5368 0.0 307.561 High  
cufflinks 44.7467 0.0 142.307 High  
cufflinks 47.986     High High
cufflinks 1.368       Low
cufflinks 7.743     High  
cufflinks 59.772     High High
cufflinks 11.528     High  
cufflinks 1.294       Low
cufflinks 20.752     High  
cufflinks 23.658     High  
cufflinks 12.409     High  
cufflinks 14.78     High  
cufflinks 14.311     High  
cufflinks 7.263     High  
cufflinks 19.171     High  
cufflinks 20.607     High  
cufflinks 2.547       Low
cufflinks 14.214     High  
cufflinks 10.096     High  

0 Strain