Gene : Glyma.02G080100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12388//PTHR12388:SF1 - MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE Genomic Order:  801
Name:  ? Glyma.02G080100 Secondary Identifier:  ? PAC:30507502
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G080100 0.5kb upstream 0.5kb upstream 2906 true Chr02: 6899950-6902855 Glycine max
Glyma.02G080100 0.5kb upstream 0.5kb upstream 500 false Chr02: 6899950-6900449 Glycine max
Glyma.02G080100 0.5kb downstream 0.5kb downstream 2906 true Chr02: 6900450-6903355 Glycine max
Glyma.02G080100 0.5kb downstream 0.5kb downstream 500 false Chr02: 6902856-6903355 Glycine max
Glyma.02G080100 1.0kb upstream 1.0kb upstream 3406 true Chr02: 6899450-6902855 Glycine max
Glyma.02G080100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6899450-6900449 Glycine max
Glyma.02G080100 1.0kb downstream 1.0kb downstream 3406 true Chr02: 6900450-6903855 Glycine max
Glyma.02G080100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6902856-6903855 Glycine max
Glyma.02G080100 2.0kb upstream 2.0kb upstream 4406 true Chr02: 6898450-6902855 Glycine max
Glyma.02G080100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6898450-6900449 Glycine max
Glyma.02G080100 2.0kb downstream 2.0kb downstream 4406 true Chr02: 6900450-6904855 Glycine max
Glyma.02G080100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6902856-6904855 Glycine max
Glyma.02G080100 5.0kb upstream 5.0kb upstream 7406 true Chr02: 6895450-6902855 Glycine max
Glyma.02G080100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6895450-6900449 Glycine max
Glyma.02G080100 5.0kb downstream 5.0kb downstream 7406 true Chr02: 6900450-6907855 Glycine max
Glyma.02G080100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6902856-6907855 Glycine max
Glyma.02G080100 10.0kb upstream 10.0kb upstream 12406 true Chr02: 6890450-6902855 Glycine max
Glyma.02G080100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6890450-6900449 Glycine max
Glyma.02G080100 10.0kb downstream 10.0kb downstream 12406 true Chr02: 6900450-6912855 Glycine max
Glyma.02G080100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6902856-6912855 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302234 5265 Fabidae View MSA
124068380 5270 Rosid View MSA
123749245 5271 Pentapetalae View MSA
122793562 5272 Eudicot View MSA
122051009 5273 Angiosperm View MSA
121349876 5274 Embryophyte View MSA
123426047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.655 0.0 55.3535    
cufflinks 7.23673 0.0 26.011   Low
cufflinks 19.2107 0.0 62.0761   High
cufflinks 8.12847 0.0 28.859   Low
cufflinks 13.866 0.0 46.5259    
cufflinks 20.6637 0.0 66.5237   High
cufflinks 9.29591 0.0 32.6447    
cufflinks 8.66643 0.0 30.619    
cufflinks 13.2888 0.0 45.1442    
cufflinks 2.146       Low
cufflinks 5.02       High
cufflinks 3.707        
cufflinks 3.932        
cufflinks 5.209       High
cufflinks 6.966     High High
cufflinks 2.402        
cufflinks 2.626        
cufflinks 2.825        
cufflinks 1.705       Low
cufflinks 2.673        
cufflinks 4.816        
cufflinks 2.669        
cufflinks 3.009        
cufflinks 4.287        
cufflinks 2.75        
cufflinks 4.488        

0 Strain