Gene : Glyma.02G079000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10871:SF6 - 40S RIBOSOMAL PROTEIN S18 Genomic Order:  790
Name:  ? Glyma.02G079000 Secondary Identifier:  ? PAC:30510088
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G079000 0.5kb upstream 0.5kb upstream 2831 true Chr02: 6825382-6828212 Glycine max
Glyma.02G079000 0.5kb upstream 0.5kb upstream 500 false Chr02: 6825382-6825881 Glycine max
Glyma.02G079000 0.5kb downstream 0.5kb downstream 2831 true Chr02: 6825882-6828712 Glycine max
Glyma.02G079000 0.5kb downstream 0.5kb downstream 500 false Chr02: 6828213-6828712 Glycine max
Glyma.02G079000 1.0kb upstream 1.0kb upstream 3331 true Chr02: 6824882-6828212 Glycine max
Glyma.02G079000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6824882-6825881 Glycine max
Glyma.02G079000 1.0kb downstream 1.0kb downstream 3331 true Chr02: 6825882-6829212 Glycine max
Glyma.02G079000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6828213-6829212 Glycine max
Glyma.02G079000 2.0kb upstream 2.0kb upstream 4331 true Chr02: 6823882-6828212 Glycine max
Glyma.02G079000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6823882-6825881 Glycine max
Glyma.02G079000 2.0kb downstream 2.0kb downstream 4331 true Chr02: 6825882-6830212 Glycine max
Glyma.02G079000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6828213-6830212 Glycine max
Glyma.02G079000 5.0kb upstream 5.0kb upstream 7331 true Chr02: 6820882-6828212 Glycine max
Glyma.02G079000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6820882-6825881 Glycine max
Glyma.02G079000 5.0kb downstream 5.0kb downstream 7331 true Chr02: 6825882-6833212 Glycine max
Glyma.02G079000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6828213-6833212 Glycine max
Glyma.02G079000 10.0kb upstream 10.0kb upstream 12331 true Chr02: 6815882-6828212 Glycine max
Glyma.02G079000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6815882-6825881 Glycine max
Glyma.02G079000 10.0kb downstream 10.0kb downstream 12331 true Chr02: 6825882-6838212 Glycine max
Glyma.02G079000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6828213-6838212 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312708 5265 Fabidae View MSA
124071434 5270 Rosid View MSA
123753104 5271 Pentapetalae View MSA
122796798 5272 Eudicot View MSA
122048414 5273 Angiosperm View MSA
121348769 5274 Embryophyte View MSA
123423828 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.86005 0.0 28.6474    
cufflinks 14.6941 0.0 40.848    
cufflinks 6.53194 0.0 20.0486   Low
cufflinks 11.9023 0.0 33.7713    
cufflinks 31.862 0.0 85.0761 High High
cufflinks 23.4259 0.0 63.1232 High  
cufflinks 24.1216 0.0 64.9 High  
cufflinks 14.9725 0.0 41.579    
cufflinks 21.9832 0.0 59.404 High  
cufflinks 5.613        
cufflinks 1.048       Low
cufflinks 4.264        
cufflinks 17.23     High High
cufflinks 24.047     High High
cufflinks 2.052        
cufflinks 4.244        
cufflinks 3.908        
cufflinks 4.934        
cufflinks 6.533        
cufflinks 2.782        
cufflinks 1.708       Low
cufflinks 3.202        
cufflinks 6.424        
cufflinks 1.245       Low
cufflinks 3.37        
cufflinks 2.774        

0 Strain