Gene : Glyma.02G082100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21654:SF19 - DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  821
Name:  ? Glyma.02G082100 Secondary Identifier:  ? PAC:30511004
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G082100 0.5kb upstream 0.5kb upstream 4998 true Chr02: 7113984-7118981 Glycine max
Glyma.02G082100 0.5kb upstream 0.5kb upstream 500 false Chr02: 7118482-7118981 Glycine max
Glyma.02G082100 0.5kb downstream 0.5kb downstream 4998 true Chr02: 7113484-7118481 Glycine max
Glyma.02G082100 0.5kb downstream 0.5kb downstream 500 false Chr02: 7113484-7113983 Glycine max
Glyma.02G082100 1.0kb upstream 1.0kb upstream 5498 true Chr02: 7113984-7119481 Glycine max
Glyma.02G082100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7118482-7119481 Glycine max
Glyma.02G082100 1.0kb downstream 1.0kb downstream 5498 true Chr02: 7112984-7118481 Glycine max
Glyma.02G082100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7112984-7113983 Glycine max
Glyma.02G082100 2.0kb upstream 2.0kb upstream 6498 true Chr02: 7113984-7120481 Glycine max
Glyma.02G082100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7118482-7120481 Glycine max
Glyma.02G082100 2.0kb downstream 2.0kb downstream 6498 true Chr02: 7111984-7118481 Glycine max
Glyma.02G082100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7111984-7113983 Glycine max
Glyma.02G082100 5.0kb upstream 5.0kb upstream 9498 true Chr02: 7113984-7123481 Glycine max
Glyma.02G082100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7118482-7123481 Glycine max
Glyma.02G082100 5.0kb downstream 5.0kb downstream 9498 true Chr02: 7108984-7118481 Glycine max
Glyma.02G082100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7108984-7113983 Glycine max
Glyma.02G082100 10.0kb upstream 10.0kb upstream 14498 true Chr02: 7113984-7128481 Glycine max
Glyma.02G082100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7118482-7128481 Glycine max
Glyma.02G082100 10.0kb downstream 10.0kb downstream 14498 true Chr02: 7103984-7118481 Glycine max
Glyma.02G082100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7103984-7113983 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313930 5265 Fabidae View MSA
124065678 5270 Rosid View MSA
123736758 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.93315 0.0 14.9607    
cufflinks 4.66593 0.0 14.4588    
cufflinks 3.55076 0.0 13.3845    
cufflinks 11.6951 0.0 33.843    
cufflinks 24.9458 0.0 81.0839 High High
cufflinks 6.87328 0.0 21.6207    
cufflinks 3.53882 0.0 11.2866    
cufflinks 4.67788 0.0 14.1463    
cufflinks 6.63739 0.0 19.5449    
cufflinks 5.227        
cufflinks 2.09        
cufflinks 2.688        
cufflinks 8.433     High High
cufflinks 18.652     High High
cufflinks 0.626       Low
cufflinks 3.375        
cufflinks 0.627       Low
cufflinks 8.877     High High
cufflinks 1.259        
cufflinks 3.527        
cufflinks 2.388        
cufflinks 3.556        
cufflinks 3.009        
cufflinks 1.127       Low
cufflinks 2.675        
cufflinks 1.846        

0 Strain