Gene : Glyma.02G087700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  877
Name:  ? Glyma.02G087700 Secondary Identifier:  ? PAC:30506967
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax DETOX1-PWY Glycine max pathologic  
Gmax DETOX1-PWY-1 Glycine max pathologic  
Gmax PWY-6854 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G087700 0.5kb upstream 0.5kb upstream 5208 true Chr02: 7659225-7664432 Glycine max
Glyma.02G087700 0.5kb upstream 0.5kb upstream 500 false Chr02: 7663933-7664432 Glycine max
Glyma.02G087700 0.5kb downstream 0.5kb downstream 5208 true Chr02: 7658725-7663932 Glycine max
Glyma.02G087700 0.5kb downstream 0.5kb downstream 500 false Chr02: 7658725-7659224 Glycine max
Glyma.02G087700 1.0kb upstream 1.0kb upstream 5708 true Chr02: 7659225-7664932 Glycine max
Glyma.02G087700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7663933-7664932 Glycine max
Glyma.02G087700 1.0kb downstream 1.0kb downstream 5708 true Chr02: 7658225-7663932 Glycine max
Glyma.02G087700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7658225-7659224 Glycine max
Glyma.02G087700 2.0kb upstream 2.0kb upstream 6708 true Chr02: 7659225-7665932 Glycine max
Glyma.02G087700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7663933-7665932 Glycine max
Glyma.02G087700 2.0kb downstream 2.0kb downstream 6708 true Chr02: 7657225-7663932 Glycine max
Glyma.02G087700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7657225-7659224 Glycine max
Glyma.02G087700 5.0kb upstream 5.0kb upstream 9708 true Chr02: 7659225-7668932 Glycine max
Glyma.02G087700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7663933-7668932 Glycine max
Glyma.02G087700 5.0kb downstream 5.0kb downstream 9708 true Chr02: 7654225-7663932 Glycine max
Glyma.02G087700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7654225-7659224 Glycine max
Glyma.02G087700 10.0kb upstream 10.0kb upstream 14708 true Chr02: 7659225-7673932 Glycine max
Glyma.02G087700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7663933-7673932 Glycine max
Glyma.02G087700 10.0kb downstream 10.0kb downstream 14708 true Chr02: 7649225-7663932 Glycine max
Glyma.02G087700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7649225-7659224 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308023 5265 Fabidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.68331 0.0 29.9617    
cufflinks 10.6813 0.0 42.8006   High
cufflinks 2.66765 0.0 14.2393   Low
cufflinks 3.95166 0.0 18.6797    
cufflinks 4.65751 0.0 21.0076    
cufflinks 2.94457 0.0 15.4333   Low
cufflinks 6.0719 0.0 25.2241    
cufflinks 4.53003 0.0 22.7072    
cufflinks 3.42377 0.0 17.0844    
cufflinks 0.446        
cufflinks 0.027     Low Low
cufflinks 0.423        
cufflinks 0.318        
cufflinks 0.468        
cufflinks 0.146        
cufflinks 1.433       High
cufflinks 0.152        
cufflinks 0.366        
cufflinks 1.233        
cufflinks 1.087        
cufflinks 0.045     Low Low
cufflinks 1.131        
cufflinks 1.848       High
cufflinks 0.038     Low Low
cufflinks 1.314       High
cufflinks 0.094        

0 Strain