Gene : Glyma.02G090500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12843:SF5 - METHYLTRANSFERASE-LIKE PROTEIN 10 Genomic Order:  905
Name:  ? Glyma.02G090500 Secondary Identifier:  ? PAC:30509640
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G090500 0.5kb upstream 0.5kb upstream 7026 true Chr02: 7979714-7986739 Glycine max
Glyma.02G090500 0.5kb upstream 0.5kb upstream 500 false Chr02: 7979714-7980213 Glycine max
Glyma.02G090500 0.5kb downstream 0.5kb downstream 7026 true Chr02: 7980214-7987239 Glycine max
Glyma.02G090500 0.5kb downstream 0.5kb downstream 500 false Chr02: 7986740-7987239 Glycine max
Glyma.02G090500 1.0kb upstream 1.0kb upstream 7526 true Chr02: 7979214-7986739 Glycine max
Glyma.02G090500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7979214-7980213 Glycine max
Glyma.02G090500 1.0kb downstream 1.0kb downstream 7526 true Chr02: 7980214-7987739 Glycine max
Glyma.02G090500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7986740-7987739 Glycine max
Glyma.02G090500 2.0kb upstream 2.0kb upstream 8526 true Chr02: 7978214-7986739 Glycine max
Glyma.02G090500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7978214-7980213 Glycine max
Glyma.02G090500 2.0kb downstream 2.0kb downstream 8526 true Chr02: 7980214-7988739 Glycine max
Glyma.02G090500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7986740-7988739 Glycine max
Glyma.02G090500 5.0kb upstream 5.0kb upstream 11526 true Chr02: 7975214-7986739 Glycine max
Glyma.02G090500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7975214-7980213 Glycine max
Glyma.02G090500 5.0kb downstream 5.0kb downstream 11526 true Chr02: 7980214-7991739 Glycine max
Glyma.02G090500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7986740-7991739 Glycine max
Glyma.02G090500 10.0kb upstream 10.0kb upstream 16526 true Chr02: 7970214-7986739 Glycine max
Glyma.02G090500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7970214-7980213 Glycine max
Glyma.02G090500 10.0kb downstream 10.0kb downstream 16526 true Chr02: 7980214-7996739 Glycine max
Glyma.02G090500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7986740-7996739 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308829 5265 Fabidae View MSA
124065361 5270 Rosid View MSA
123737741 5271 Pentapetalae View MSA
122789553 5272 Eudicot View MSA
122041744 5273 Angiosperm View MSA
121347606 5274 Embryophyte View MSA
123380579 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8726 0.0 34.9416    
cufflinks 9.31141 0.0 25.9082   Low
cufflinks 9.93832 0.0 27.5177   Low
cufflinks 12.0757 0.0 32.9368    
cufflinks 14.882 0.0 40.0925    
cufflinks 20.0938 0.0 53.664   High
cufflinks 12.0184 0.0 32.8085    
cufflinks 14.5966 0.0 39.3508    
cufflinks 10.8277 0.0 29.7406    
cufflinks 2.597        
cufflinks 2.575        
cufflinks 2.138        
cufflinks 3.319       High
cufflinks 3.738       High
cufflinks 2.036        
cufflinks 2.164        
cufflinks 2.119        
cufflinks 2.005        
cufflinks 2.649        
cufflinks 1.785       Low
cufflinks 3.393       High
cufflinks 1.993        
cufflinks 2.15        
cufflinks 3.482       High
cufflinks 1.861       Low
cufflinks 3.348       High

0 Strain